8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_282876
Cell Name :  20160720_BGUG_HuC_ltRFP_d6_F4
Archive Name :  Baier
Species Name :  zebrafish
Strain :  Gal4-s1013tET
Structural Domains :  Neurites, Soma
Physical Integrity :  Neurites Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  5.0 days
Max Age :  7.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  larval
Primary Brain Region :  Not reported
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Periventricular Projection Neurons (PVPN)
Tertiary Cell Class :  Dorsal thalamus-projecting, Pretectum-projecting, Class 4, Medulla oblongata-projecting, Hypothalamus-projecting, Inferior Raphe-projecting
Original Format :  neuTube.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  green fluorescent protein
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  electron microscopy
Magnification :  20x
Reconstruction Method :  neuTube
Date of Deposition :  2020-11-24
Date of Upload :  2024-04-30
Persistence Vector :  20160720_BGUG_HuC_ltRFP_d6_F4.pvec

Reference Article
Related Article Reference :  Topography of a Visuomotor Transformation.

Measurements
Soma Surface :  248.62 μm2
Number of Stems :  1
Number of Bifurcations :  20
Number of Branches :  41
Overall Width :  64.3 μm
Overall Height :  364.12 μm
Overall Depth :  207.63 μm
Average Diameter :  2.96 μm
Total Length :  1170.13 μm
Total Surface :  11331 μm2
Total Volume :  9336.63 μm3
Max Euclidean Distance :  402.64 μm
Max Path Distance :  606.34 μm
Max Branch Order :  8
Average Contraction :  0.87
Total Fragmentation :  433
Partition Asymmetry :  0.48
Average Rall's Ratio :  2.77
Average Bifurcation Angle Local :  85.42°
Average Bifurcation Angle Remote :  83.29°
Fractal Dimension :  1.05

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