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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_193558 |
| Cell Name : | 2016-10-7_mir-1_541_day_3_7 |
| Archive Name : | Hart |
| Species Name : | C. elegans |
| Strain : | N2 |
| Structural Domains : | Neurites, Soma |
| Physical Integrity : | Neurites Moderate |
| Morphological Attributes : | No Diameter, 3D, Angles |
| Min Age : | 3.0 days
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| Max Age : | 3.0 days
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| Gender : |
Male
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| Min Weight : | Not reported
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| Max Weight : | Not reported
|
| Development : | adult |
| Primary Brain Region : | somatic nervous system |
| Secondary Brain Region : | dorsorectal ganglion |
| Tertiary Brain Region : | Not reported |
| Primary Cell Class : | interneuron |
| Secondary Cell Class : | Motoneuron |
| Tertiary Cell Class : | GABAergic, DVB |
| Original Format : | Simple Neurite Tracer.swc |
| Experiment Protocol : | in vivo |
| Experimental Condition : | mir-1 mutant |
| Staining Method : | mcherry, immunostaining |
| Slicing Direction : | whole mount |
| Slice Thickness : | Not applicable
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| Tissue Shrinkage : |
Not reported
|
| Objective Type : | oil |
| Magnification : | 63x |
| Reconstruction Method : | Simple Neurite Tracer |
| Date of Deposition : | 2022-05-31 |
| Date of Upload : | 2022-07-12 |
| Persistence Vector : | 2016-10-7_mir-1_541_day_3_7.pvec |
| Note : | Male worms were picked at the fourth larval stage onto plates with 10 other males. All plasmids were injected at 25 ng per microliter with coinjection marker ttx-3::wCherry also at 25 ng per microliter to generate extrachromosomal arrays. The primary neurite of DVB was traced from the centre of the cell soma to the point where the axon projects ventrally and then turns anteriorly, at the final branch point before it becomes a single process. Neurites were added by tracing off of this primary neurite, including all neurites emanating posterior of the last branch point. |
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| Reference Article |
| Related Article Reference : | Neurexin controls plasticity of a mature, sexually dimorphic neuron. |
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| Measurements |
| Soma Surface : |
3.06 μm2 |
| Number of Stems : |
2 |
| Number of Bifurcations : |
3 |
| Number of Branches : |
8 |
| Overall Width : |
43.44 μm |
| Overall Height : |
10.85 μm |
| Overall Depth : |
2.83 μm |
| Average Diameter : |
0.25 μm |
| Total Length : |
74.15 μm |
| Total Surface : |
58.24 μm2 |
| Total Volume : |
3.64 μm3 |
| Max Euclidean Distance : |
39.38 μm |
| Max Path Distance : |
47.22 μm |
| Max Branch Order : |
3 |
| Average Contraction : |
0.84 |
| Total Fragmentation : |
436 |
| Partition Asymmetry : |
0.67 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
122.78° |
| Average Bifurcation Angle Remote : |
97.78° |
| Fractal Dimension : |
1.1 |
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