|
| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_51116 |
| Cell Name : | 2014-06-24-N3_All |
| Archive Name : | Chandrashekar |
| Species Name : | mouse |
| Strain : | C57BL/6 |
| Structural Domains : | Dendrites, No Soma, Axon |
| Physical Integrity : | Dendrites Moderate, Axon Complete |
| Morphological Attributes : | No Diameter, 3D, Angles |
| Min Age : | 6.0 months
|
| Max Age : | 6.0 months
|
| Gender : |
Female
|
| Min Weight : | 25 grams
|
| Max Weight : | 25 grams
|
| Development : | adult |
| Primary Brain Region : | neocortex |
| Secondary Brain Region : | frontal |
| Tertiary Brain Region : | primary motor, layer 2 |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | pyramidal |
| Tertiary Cell Class : | Not reported |
| Original Format : | Janelia Workstation-Large Volume Viewer.swc |
| Experiment Protocol : | in vivo |
| Experimental Condition : | Control |
| Staining Method : | enhanced green fluorescent protein |
| Slicing Direction : | coronal |
| Slice Thickness : | 25
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | oil |
| Magnification : | 40x |
| Reconstruction Method : | Janelia Workstation-Large Volume Viewer |
| Date of Deposition : | 2016-01-23 |
| Date of Upload : | 2017-03-30 |
| Persistence Vector : | 2014-06-24-N3_All.pvec |
| Note : | Imaged at ~0.3 x 0.3 x 1 micron resolution with physical overlap in x,y and z between imaged volumes |
|
|
| Reference Article |
| Related Article Reference : | A platform for brain-wide imaging and reconstruction of individual neurons. |
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|
| Measurements |
| Soma Surface : |
N/A |
| Number of Stems : |
1 |
| Number of Bifurcations : |
179 |
| Number of Branches : |
359 |
| Overall Width : |
3579.95 μm |
| Overall Height : |
2793.88 μm |
| Overall Depth : |
3513.76 μm |
| Average Diameter : |
2 μm |
| Total Length : |
55661.6 μm |
| Total Surface : |
349732 μm2 |
| Total Volume : |
174866 μm3 |
| Max Euclidean Distance : |
4240.96 μm |
| Max Path Distance : |
9154.45 μm |
| Max Branch Order : |
21 |
| Average Contraction : |
0.9 |
| Total Fragmentation : |
7323 |
| Partition Asymmetry : |
0.48 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
69.75° |
| Average Bifurcation Angle Remote : |
62.44° |
| Fractal Dimension : |
1.03 |
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