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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_177841 |
| Cell Name : | 2014-01-30_U01 |
| Archive Name : | Bardy |
| Species Name : | human |
| Strain : | Not applicable |
| Structural Domains : | Dendrites, Soma, No Axon |
| Physical Integrity : | Dendrites Moderate |
| Morphological Attributes : | No Diameter, 2D, Angles |
| Min Age : | Not reported
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| Max Age : | Not reported
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| Gender : |
Male/Female
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| Min Weight : | Not reported
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| Max Weight : | Not reported
|
| Development : | embryonic |
| Primary Brain Region : | brainstem |
| Secondary Brain Region : | midbrain |
| Tertiary Brain Region : | Not reported |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | embryonic stem cell (ESC)-derived |
| Tertiary Cell Class : | fusiform, serotonergic TPH2 |
| Original Format : | Neurolucida.dat |
| Experiment Protocol : | culture |
| Experimental Condition : | Control |
| Staining Method : | Avidin-Rhodamine Red |
| Slicing Direction : | Not applicable |
| Slice Thickness : | Not applicable
|
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | water |
| Magnification : | 40x |
| Reconstruction Method : | Neurolucida |
| Date of Deposition : | 2022-01-17 |
| Date of Upload : | 2022-02-22 |
| Persistence Vector : | 2014-01-30_U01.pvec |
| Note : | To obtain physiologically relevant neuronal circuits, we generated mixed cultures of neurotransmitter classes and astrocytes. This reconstruction belongs to a functional type 5 classification. Type 5 neurons fired APs above -10mv at 10 Hz or more. This reconstruction was obtained from a culture with 40 days of maturation and was classified as fusiform/bipolar. |
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| Reference Article |
| Related Article Reference : | Predicting the functional states of human iPSC-derived neurons with single-cell RNA-seq and electrophysiology. |
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| Measurements |
| Soma Surface : |
1049.14 μm2 |
| Number of Stems : |
2 |
| Number of Bifurcations : |
19 |
| Number of Branches : |
40 |
| Overall Width : |
205.19 μm |
| Overall Height : |
349.08 μm |
| Overall Depth : |
0.07 μm |
| Average Diameter : |
0.32 μm |
| Total Length : |
2104.38 μm |
| Total Surface : |
2115.55 μm2 |
| Total Volume : |
169.24 μm3 |
| Max Euclidean Distance : |
212.98 μm |
| Max Path Distance : |
251.22 μm |
| Max Branch Order : |
6 |
| Average Contraction : |
0.97 |
| Total Fragmentation : |
298 |
| Partition Asymmetry : |
0.45 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
65.19° |
| Average Bifurcation Angle Remote : |
66.12° |
| Fractal Dimension : |
1.01 |
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