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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_177835 |
| Cell Name : | 2014-01-29_U02 |
| Archive Name : | Bardy |
| Species Name : | human |
| Strain : | Not applicable |
| Structural Domains : | Dendrites, Soma, No Axon |
| Physical Integrity : | Dendrites Moderate |
| Morphological Attributes : | No Diameter, 2D, Angles |
| Min Age : | Not reported
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| Max Age : | Not reported
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| Gender : |
Male/Female
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
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| Development : | embryonic |
| Primary Brain Region : | brainstem |
| Secondary Brain Region : | midbrain |
| Tertiary Brain Region : | Not reported |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | embryonic stem cell (ESC)-derived |
| Tertiary Cell Class : | pyramidal, prox 139 |
| Original Format : | Neurolucida.dat |
| Experiment Protocol : | culture |
| Experimental Condition : | Control |
| Staining Method : | Avidin-Rhodamine Red |
| Slicing Direction : | Not applicable |
| Slice Thickness : | Not applicable
|
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | water |
| Magnification : | 40x |
| Reconstruction Method : | Neurolucida |
| Date of Deposition : | 2022-01-17 |
| Date of Upload : | 2022-02-22 |
| Persistence Vector : | 2014-01-29_U02.pvec |
| Note : | To obtain physiologically relevant neuronal circuits, we generated mixed cultures of neurotransmitter classes and astrocytes. This reconstruction belongs to a functional type 5 classification. Type 5 neurons fired APs above -10mv at 10 Hz or more. This reconstruction was obtained from a culture with 39 days of maturation. |
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| Reference Article |
| Related Article Reference : | Predicting the functional states of human iPSC-derived neurons with single-cell RNA-seq and electrophysiology. |
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| Measurements |
| Soma Surface : |
548.11 μm2 |
| Number of Stems : |
4 |
| Number of Bifurcations : |
5 |
| Number of Branches : |
14 |
| Overall Width : |
191.67 μm |
| Overall Height : |
227.98 μm |
| Overall Depth : |
0 μm |
| Average Diameter : |
0.32 μm |
| Total Length : |
722.87 μm |
| Total Surface : |
726.71 μm2 |
| Total Volume : |
58.14 μm3 |
| Max Euclidean Distance : |
135.56 μm |
| Max Path Distance : |
138.51 μm |
| Max Branch Order : |
2 |
| Average Contraction : |
0.98 |
| Total Fragmentation : |
114 |
| Partition Asymmetry : |
0.4 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
62.15° |
| Average Bifurcation Angle Remote : |
49.31° |
| Fractal Dimension : |
1 |
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0
