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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_61340 |
| Cell Name : | 20131227_a1_reconstruction |
| Archive Name : | Sjostrom |
| Species Name : | mouse |
| Strain : | C57BL/6 |
| Structural Domains : | Dendrites, Soma, Axon |
| Physical Integrity : | Dendrites & Axon Complete |
| Morphological Attributes : | Diameter, 3D, Angles |
| Min Age : | 12.0 days
|
| Max Age : | 21.0 days
|
| Gender : |
Male/Female
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | young |
| Primary Brain Region : | neocortex |
| Secondary Brain Region : | occipital |
| Tertiary Brain Region : | primary visual, layer 5 |
| Primary Cell Class : | interneuron |
| Secondary Cell Class : | basket |
| Tertiary Cell Class : | Type 2, Parvalbumin (PV)-positive |
| Original Format : | Neuromantic.swc |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | Alexa Fluor 594 |
| Slicing Direction : | coronal |
| Slice Thickness : | 300
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | water |
| Magnification : | 40x |
| Reconstruction Method : | Neuromantic |
| Date of Deposition : | 2015-01-28 |
| Date of Upload : | 2017-03-30 |
| Persistence Vector : | 20131227_a1_reconstruction.pvec |
| Note : | NOT suitable for multi-compartmental models (diameters are overestimated). Additional files indicate cortical layer boundaries and the extent imaged. |
|
|
| Reference Article |
| Related Article Reference : | Synapse-specific expression of calcium-permeable AMPA receptors in neocortical layer 5. |
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|
| Measurements |
| Soma Surface : |
58.29 μm2 |
| Number of Stems : |
3 |
| Number of Bifurcations : |
103 |
| Number of Branches : |
209 |
| Overall Width : |
331.23 μm |
| Overall Height : |
306.85 μm |
| Overall Depth : |
134.7 μm |
| Average Diameter : |
1.61 μm |
| Total Length : |
5850.1 μm |
| Total Surface : |
30435.3 μm2 |
| Total Volume : |
15243.8 μm3 |
| Max Euclidean Distance : |
323.16 μm |
| Max Path Distance : |
533.1 μm |
| Max Branch Order : |
20 |
| Average Contraction : |
0.91 |
| Total Fragmentation : |
1578 |
| Partition Asymmetry : |
0.59 |
| Average Rall's Ratio : |
1.79 |
| Average Bifurcation Angle Local : |
78.76° |
| Average Bifurcation Angle Remote : |
80.7° |
| Fractal Dimension : |
1.03 |
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