8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_80302
Cell Name :  20130826cell11
Archive Name :  Zhang_X
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  50.0 days
Max Age :  60.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  CA1
Tertiary Brain Region :  pyramidal layer, dorsal
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  simple
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  transverse
Slice Thickness :  350  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  Neurolucida
Date of Deposition :  2017-04-11
Date of Upload :  2017-11-28
Persistence Vector :  20130826cell11.pvec
Note :  The SWC units for this cell are expressed in pixels rather than in microns. Thus, the morphometric measurements can be compared within other cells within this archive, but not across the rest of the database.

Reference Article
Related Article Reference :  A distinct entorhinal cortex to hippocampal CA1 direct circuit for olfactory associative learning.

Measurements
Soma Surface :  110.09 μm2
Number of Stems :  6
Number of Bifurcations :  55
Number of Branches :  116
Overall Width :  30.62 μm
Overall Height :  102.23 μm
Overall Depth :  12.45 μm
Average Diameter :  0.27 μm
Total Length :  944.85 μm
Total Surface :  931.1 μm2
Total Volume :  87.91 μm3
Max Euclidean Distance :  85.81 μm
Max Path Distance :  95 μm
Max Branch Order :  23
Average Contraction :  0.94
Total Fragmentation :  4205
Partition Asymmetry :  0.58
Average Rall's Ratio :  1.7
Average Bifurcation Angle Local :  65.73°
Average Bifurcation Angle Remote :  48.08°
Fractal Dimension :  1.03

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