8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_04587
Cell Name :  2004-02-16-C-L23dendax
Archive Name :  Helmstaedter
Species Name :  rat
Strain :  Wistar
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Complete, Axon Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  20.0 days
Max Age :  29.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  neocortex
Secondary Brain Region :  somatosensory
Tertiary Brain Region :  layer 2-3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  thalamocortical
Slice Thickness :  350  μm
Tissue Shrinkage :  Reported (no values given)
Not corrected
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2008-10-17
Date of Upload :  2009-03-25
Persistence Vector :  2004-02-16-C-L23dendax.pvec
Note :  When originally released, this reconstruction had been incompletely processed, and this issue was fixed in release 6.1 (May 2015). The pre-6.1 version of the processed file is available for download here.

Reference Article
Related Article Reference :  The relation between dendritic geometry, electrical excitability, and axonal projections of L2/3 Interneurons in rat barrel cortex.

Measurements
Soma Surface :  680.63 μm2
Number of Stems :  8
Number of Bifurcations :  180
Number of Branches :  368
Overall Width :  689.7 μm
Overall Height :  1078.42 μm
Overall Depth :  368.65 μm
Average Diameter :  0.48 μm
Total Length :  30174.8 μm
Total Surface :  41404.1 μm2
Total Volume :  12939.9 μm3
Max Euclidean Distance :  983.96 μm
Max Path Distance :  1401.7 μm
Max Branch Order :  22
Average Contraction :  0.86
Total Fragmentation :  5948
Partition Asymmetry :  0.55
Average Rall's Ratio :  1.81
Average Bifurcation Angle Local :  84.17°
Average Bifurcation Angle Remote :  75.83°
Fractal Dimension :  1.04

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website