8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_04544
Cell Name :  2001-10-11-C-L23-dendax
Archive Name :  Helmstaedter
Species Name :  rat
Strain :  Wistar
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  20.0 days
Max Age :  29.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  neocortex
Secondary Brain Region :  somatosensory
Tertiary Brain Region :  layer 2-3
Primary Cell Class :  interneuron
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  thalamocortical
Slice Thickness :  350  μm
Tissue Shrinkage :  Reported (no values given)
Not corrected
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2008-10-17
Date of Upload :  2009-03-25
Persistence Vector :  2001-10-11-C-L23-dendax.pvec
Note :  When originally released, this reconstruction had been incompletely processed, and this issue was fixed in release 6.1 (May 2015). The pre-6.1 version of the processed file is available for download here.

Reference Article
Related Article Reference :  The relation between dendritic geometry, electrical excitability, and axonal projections of L2/3 Interneurons in rat barrel cortex.

Measurements
Soma Surface :  777.74 μm2
Number of Stems :  8
Number of Bifurcations :  357
Number of Branches :  722
Overall Width :  398.4 μm
Overall Height :  488.86 μm
Overall Depth :  285.39 μm
Average Diameter :  0.28 μm
Total Length :  29320.7 μm
Total Surface :  26441.6 μm2
Total Volume :  5698.67 μm3
Max Euclidean Distance :  438.92 μm
Max Path Distance :  1104.57 μm
Max Branch Order :  31
Average Contraction :  0.81
Total Fragmentation :  15147
Partition Asymmetry :  0.52
Average Rall's Ratio :  1.75
Average Bifurcation Angle Local :  88.25°
Average Bifurcation Angle Remote :  78.34°
Fractal Dimension :  1.06

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