8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_278506
Cell Name :  20-1_4
Archive Name :  Celdran
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Neurites, Soma
Physical Integrity :  Neurites Moderate
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  16.0 days
Max Age :  19.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  neocortex
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  embryonic stem cell (ESC)-derived
Tertiary Cell Class :  Not reported
Original Format :  NeuronJ.ndf
Experiment Protocol :  culture
Experimental Condition :  pAAV-Syn-CHrimsonR-tdT expression
Staining Method :  td Tomato fluorescent protein
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  40x , 63x
Reconstruction Method :  NeuronJ
Date of Deposition :  2023-09-08
Date of Upload :  2024-03-14
Persistence Vector :  20-1_4.pvec
Note :  Cells in Neurobasal medium were seeded and incubated in 24-well plates between 7-11 days in vitro (DIV) before transfecting.

Reference Article
Related Article Reference :  Assessment of Different Niosome Formulations for Optogenetic Applications: Morphological and Electrophysiological Effects.

Measurements
Soma Surface :  11398.5 μm2
Number of Stems :  3
Number of Bifurcations :  8
Number of Branches :  19
Overall Width :  305.65 μm
Overall Height :  252.15 μm
Overall Depth :  0.44 μm
Average Diameter :  1 μm
Total Length :  1351.85 μm
Total Surface :  4246.95 μm2
Total Volume :  1061.74 μm3
Max Euclidean Distance :  287.98 μm
Max Path Distance :  309.92 μm
Max Branch Order :  4
Average Contraction :  0.98
Total Fragmentation :  230
Partition Asymmetry :  0.44
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  73.77°
Average Bifurcation Angle Remote :  59.44°
Fractal Dimension :  1

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