8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_165558
Cell Name :  195409-006_000_reg
Archive Name :  BICCN-MOp-miniatlas-anatomy
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  56.0 days
Max Age :  56.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  primary motor, layer 2-3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Intratelencephalic (IT)
Original Format :  GTree.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  Adeno-associated virus (AAV)
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  GTree
Date of Deposition :  2020-04-03
Date of Upload :  2021-10-06
Persistence Vector :  195409-006_000_reg.pvec
Note :  This reconstruction was obtained from theHUST-Suzhou Institute for Brainsmatics, and it is registered to the Common Coordinate Framework (CCF).

Reference Article
Related Article Reference :  Cellular Anatomy of the Mouse Primary Motor Cortex

Measurements
Soma Surface :  95.16 μm2
Number of Stems :  9
Number of Bifurcations :  294
Number of Branches :  597
Overall Width :  6940.07 μm
Overall Height :  2509.57 μm
Overall Depth :  3600.83 μm
Average Diameter :  2 μm
Total Length :  63209.4 μm
Total Surface :  397157 μm2
Total Volume :  198578 μm3
Max Euclidean Distance :  4432.75 μm
Max Path Distance :  6905.53 μm
Max Branch Order :  38
Average Contraction :  0.92
Total Fragmentation :  12778
Partition Asymmetry :  0.57
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  21.2°
Average Bifurcation Angle Remote :  62.16°
Fractal Dimension :  1.02

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website