8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_165489
Cell Name :  195401-046_000_reg
Archive Name :  BICCN-MOp-miniatlas-anatomy
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  56.0 days
Max Age :  56.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  primary motor, layer 5
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  pyramidal tract (PT) cell Sim1+
Original Format :  GTree.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  Adeno-associated virus (AAV)
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  GTree
Date of Deposition :  2020-04-03
Date of Upload :  2021-10-06
Persistence Vector :  195401-046_000_reg.pvec
Note :  This reconstruction was obtained from the HUST-Suzhou Institute for Brainsmatics, and it is registered to the Common Coordinate Framework (CCF).

Reference Article
Related Article Reference :  Cellular Anatomy of the Mouse Primary Motor Cortex

Measurements
Soma Surface :  85.97 μm2
Number of Stems :  11
Number of Bifurcations :  1085
Number of Branches :  2181
Overall Width :  4191.71 μm
Overall Height :  9557.52 μm
Overall Depth :  4736.74 μm
Average Diameter :  2 μm
Total Length :  174751 μm
Total Surface :  1097990 μm2
Total Volume :  548995 μm3
Max Euclidean Distance :  11258.3 μm
Max Path Distance :  19198.5 μm
Max Branch Order :  58
Average Contraction :  0.93
Total Fragmentation :  12811
Partition Asymmetry :  0.66
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  29.93°
Average Bifurcation Angle Remote :  67.53°
Fractal Dimension :  1.01

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