8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
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Log File (Original)



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NeuroMorpho.Org ID :  NMO_165523
Cell Name :  195401-020_000_reg
Archive Name :  BICCN-MOp-miniatlas-anatomy
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  56.0 days
Max Age :  56.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  primary motor, layer 2-3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  pyramidal tract (PT) cell Sim1+
Original Format :  GTree.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  Adeno-associated virus (AAV)
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  GTree
Date of Deposition :  2020-04-03
Date of Upload :  2021-10-06
Persistence Vector :  195401-020_000_reg.pvec
Note :  This reconstruction was obtained from the HUST-Suzhou Institute for Brainsmatics, and it is registered to the Common Coordinate Framework (CCF).

Reference Article
Related Article Reference :  Cellular Anatomy of the Mouse Primary Motor Cortex

Measurements
Soma Surface :  34.28 μm2
Number of Stems :  9
Number of Bifurcations :  603
Number of Branches :  1215
Overall Width :  2627.09 μm
Overall Height :  7645 μm
Overall Depth :  6386.97 μm
Average Diameter :  2 μm
Total Length :  107515 μm
Total Surface :  675507 μm2
Total Volume :  337746 μm3
Max Euclidean Distance :  8587.36 μm
Max Path Distance :  12312 μm
Max Branch Order :  35
Average Contraction :  0.9
Total Fragmentation :  23379
Partition Asymmetry :  0.66
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  30.79°
Average Bifurcation Angle Remote :  72.63°
Fractal Dimension :  1.02

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