8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_165352
Cell Name :  195401-007_000_reg
Archive Name :  BICCN-MOp-miniatlas-anatomy
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  56.0 days
Max Age :  56.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  primary motor, layer 5
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Intratelencephalic (IT)
Original Format :  GTree.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  Adeno-associated virus (AAV)
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  GTree
Date of Deposition :  2020-04-03
Date of Upload :  2021-10-06
Persistence Vector :  195401-007_000_reg.pvec
Note :  This reconstruction was obtained from the HUST-Suzhou Institute for Brainsmatics, and it is registered to the Common Coordinate Framework (CCF).

Reference Article
Related Article Reference :  Cellular Anatomy of the Mouse Primary Motor Cortex

Measurements
Soma Surface :  34.35 μm2
Number of Stems :  9
Number of Bifurcations :  340
Number of Branches :  689
Overall Width :  6991.39 μm
Overall Height :  4495.35 μm
Overall Depth :  4344.94 μm
Average Diameter :  2 μm
Total Length :  114076 μm
Total Surface :  716768 μm2
Total Volume :  358388 μm3
Max Euclidean Distance :  6994.23 μm
Max Path Distance :  11345.8 μm
Max Branch Order :  24
Average Contraction :  0.91
Total Fragmentation :  20965
Partition Asymmetry :  0.54
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  32.84°
Average Bifurcation Angle Remote :  64.94°
Fractal Dimension :  1.02

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