8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_165545
Cell Name :  18864_2520-X2913-Y22642
Archive Name :  BICCN-MOp-miniatlas-anatomy
Species Name :  mouse
Strain :  Cux2-CreERT2;Ai166
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  56.0 days
Max Age :  56.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  secondary motor, layer 2
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Intratelencephalic (IT), tufted, bilateral-projecting
Original Format :  Vaa3D.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  enhanced green fluorescent protein
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Vaa3D
Date of Deposition :  2020-04-03
Date of Upload :  2021-10-06
Persistence Vector :  18864_2520-X2913-Y22642.pvec
Note :  This reconstruction was obtained from the Allen Institute for Brain Science, and it is registered to the Common Coordinate Framework (CCF). This reconstruction has the soma located at the border of MOs/MOp.

Reference Article
Related Article Reference :  Cellular Anatomy of the Mouse Primary Motor Cortex

Measurements
Soma Surface :  85.23 μm2
Number of Stems :  7
Number of Bifurcations :  627
Number of Branches :  1261
Overall Width :  16913.8 μm
Overall Height :  8049.7 μm
Overall Depth :  3112.81 μm
Average Diameter :  2 μm
Total Length :  199797 μm
Total Surface :  1255360 μm2
Total Volume :  627680 μm3
Max Euclidean Distance :  11123.4 μm
Max Path Distance :  18322.5 μm
Max Branch Order :  50
Average Contraction :  0.94
Total Fragmentation :  5904
Partition Asymmetry :  0.67
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  68.77°
Average Bifurcation Angle Remote :  63.96°
Fractal Dimension :  1.01

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website