8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_165578
Cell Name :  18453_1924-x22284-y8069swc_sorted-ano
Archive Name :  BICCN-MOp-miniatlas-anatomy
Species Name :  mouse
Strain :  Cux2-CreERT2;Ai166
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  56.0 days
Max Age :  56.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  secondary motor, layer 2
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Intratelencephalic (IT), tufted, bilateral-projecting
Original Format :  Vaa3D.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  enhanced green fluorescent protein
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Vaa3D
Date of Deposition :  2020-04-03
Date of Upload :  2021-10-06
Persistence Vector :  18453_1924-x22284-y8069swc_sorted-ano.pvec
Note :  This reconstruction was obtained from the Allen Institute for Brain Science, and it is registered to the Common Coordinate Framework (CCF).

Reference Article
Related Article Reference :  Cellular Anatomy of the Mouse Primary Motor Cortex

Measurements
Soma Surface :  62.1 μm2
Number of Stems :  6
Number of Bifurcations :  530
Number of Branches :  1066
Overall Width :  10592.9 μm
Overall Height :  12110.4 μm
Overall Depth :  3861.41 μm
Average Diameter :  2 μm
Total Length :  162988 μm
Total Surface :  1024090 μm2
Total Volume :  512043 μm3
Max Euclidean Distance :  13275.8 μm
Max Path Distance :  17126.3 μm
Max Branch Order :  50
Average Contraction :  0.94
Total Fragmentation :  10051
Partition Asymmetry :  0.69
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  57.26°
Average Bifurcation Angle Remote :  51.11°
Fractal Dimension :  1.01

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