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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_164846 |
| Cell Name : | 17545_00175-semi_r |
| Archive Name : | Peng |
| Species Name : | mouse |
| Strain : | Tnnt1-IRES2-CreERT2;Ai82;Ai140 |
| Structural Domains : | Dendrites, Soma, Axon |
| Physical Integrity : | Dendrites & Axon Complete |
| Morphological Attributes : | No Diameter, 3D, Angles |
| Min Age : | 56.0 days
|
| Max Age : | 56.0 days
|
| Gender : |
Male/Female
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | adult |
| Primary Brain Region : | thalamus |
| Secondary Brain Region : | submedial nucleus |
| Tertiary Brain Region : | Not reported |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | projection |
| Tertiary Cell Class : | Not reported |
| Original Format : | Vaa3D.swc |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | green fluorescent protein |
| Slicing Direction : | whole mount |
| Slice Thickness : | Not applicable
|
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | dry |
| Magnification : | 40x |
| Reconstruction Method : | Vaa3D |
| Date of Deposition : | 2020-10-28 |
| Date of Upload : | 2021-10-04 |
| Persistence Vector : | 17545_00175-semi_r.pvec |
| Note : | This reconstruction is registered to the Common Coordinate Framework (CCF). The original files as well as 3D navigation movie-gallery of these data are available at SEU-ALLEN Joint Center, Institute for Brain and Intelligence (https://braintell.org/projects/fullmorpho/). |
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| Reference Article |
| Related Article Reference : | Brain-wide single neuron reconstruction reveals morphological diversity in molecularly defined striatal, thalamic, cortical and claustral neuron types |
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| Measurements |
| Soma Surface : |
309.43 μm2 |
| Number of Stems : |
6 |
| Number of Bifurcations : |
344 |
| Number of Branches : |
694 |
| Overall Width : |
1690.26 μm |
| Overall Height : |
3046.27 μm |
| Overall Depth : |
2629.17 μm |
| Average Diameter : |
0.25 μm |
| Total Length : |
63937.3 μm |
| Total Surface : |
50216.3 μm2 |
| Total Volume : |
3138.52 μm3 |
| Max Euclidean Distance : |
4075.22 μm |
| Max Path Distance : |
6855.5 μm |
| Max Branch Order : |
34 |
| Average Contraction : |
0.96 |
| Total Fragmentation : |
6628 |
| Partition Asymmetry : |
0.58 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
78.06° |
| Average Bifurcation Angle Remote : |
69.96° |
| Fractal Dimension : |
1.01 |
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