8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_161199
Cell Name :  17012_61_c
Archive Name :  Ruiyu
Species Name :  mouse
Strain :  DAT-Cre
Structural Domains :  No Dendrites, No Soma, Axon
Physical Integrity :  Axon Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  8.0 months
Max Age :  8.0 months
Gender :  Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  mesencephalon
Secondary Brain Region :  midbrain tegmentum
Tertiary Brain Region :  Ventral Tegmental Area
Primary Cell Class :  principal cell
Secondary Cell Class :  dopaminergic
Tertiary Cell Class :  Not reported
Original Format :  Amira.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  AAV2-EF1a-DIO-mCherry
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  10x
Reconstruction Method :  Amira
Date of Deposition :  2021-05-17
Date of Upload :  2021-08-04
Persistence Vector :  17012_61_c.pvec
Note :  The following coordinates were used to target specific brain areas: 3.2 mm posterior to the bregma, 1.68 mm lateral to the midline, and 4.56 mm ventral to the skull surface with a 15 dregees angle (lateral to middle) for the ventral tegmental area (VTA). Mice were sacrificed and perfused 3 weeks after virus injection.

Reference Article
Related Article Reference :  The Raphe Dopamine System Controls the Expression of Incentive Memory.

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  1297
Number of Branches :  2595
Overall Width :  1361.02 μm
Overall Height :  5626.42 μm
Overall Depth :  1104.74 μm
Average Diameter :  0.83 μm
Total Length :  144565 μm
Total Surface :  362046 μm2
Total Volume :  140556 μm3
Max Euclidean Distance :  4886.84 μm
Max Path Distance :  8511.48 μm
Max Branch Order :  39
Average Contraction :  0.81
Total Fragmentation :  66633
Partition Asymmetry :  0.56
Average Rall's Ratio :  3.41
Average Bifurcation Angle Local :  82.32°
Average Bifurcation Angle Remote :  78.29°
Fractal Dimension :  1.06

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