8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
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Log File (Original)



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NeuroMorpho.Org ID :  NMO_165467
Cell Name :  16167_reg8
Archive Name :  BICCN-MOp-miniatlas-anatomy
Species Name :  mouse
Strain :  Thy1-YFP-H
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  56.0 days
Max Age :  56.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  primary motor, layer 5
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  pyramidal tract (PT) cell Sim1+
Original Format :  GTree.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  yellow fluorescent protein
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  GTree
Date of Deposition :  2020-04-03
Date of Upload :  2021-10-06
Persistence Vector :  16167_reg8.pvec
Note :  This reconstruction was obtained from the HUST-Suzhou Institute for Brainsmatics, and it is registered to the Common Coordinate Framework (CCF).

Reference Article
Related Article Reference :  Cellular Anatomy of the Mouse Primary Motor Cortex

Measurements
Soma Surface :  69.33 μm2
Number of Stems :  10
Number of Bifurcations :  188
Number of Branches :  386
Overall Width :  4635.33 μm
Overall Height :  6457.06 μm
Overall Depth :  6644.96 μm
Average Diameter :  0.46 μm
Total Length :  54349.2 μm
Total Surface :  78541.8 μm2
Total Volume :  9032.3 μm3
Max Euclidean Distance :  9665.68 μm
Max Path Distance :  13389.3 μm
Max Branch Order :  26
Average Contraction :  0.91
Total Fragmentation :  9224
Partition Asymmetry :  0.64
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  69.04°
Average Bifurcation Angle Remote :  72.38°
Fractal Dimension :  1.03

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