8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_140803
Cell Name :  16--OTC-Control-9-weeks-20x_1
Archive Name :  Michaelson
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  14.0 days
Max Age :  14.0 days
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  amygdala
Secondary Brain Region :  basolateral amygdala complex
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Simple Neurite Tracer.traces
Experiment Protocol :  culture
Experimental Condition :  Control
Staining Method :  Neurobiotin
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2020-07-08
Date of Upload :  2020-10-08
Persistence Vector :  16--OTC-Control-9-weeks-20x_1.pvec
Note :  Reconstructions are from organotypic cultures from 2 weeks old rat and viable to at least 8weeks in culture, the equivalent postnatal (EP) age of 9-10 weeks. This reconstruction belongs to a control subset of cultures that were treated with the inactive desamido-NPY analog (da-NPY, 100 nM).

Reference Article
Related Article Reference :  Contribution of NPY Y5 Receptors to the Reversible Structural Remodeling of Basolateral Amygdala Dendrites in Male Rats Associated with NPY-Mediated Stress Resilience.

Measurements
Soma Surface :  197.69 μm2
Number of Stems :  4
Number of Bifurcations :  26
Number of Branches :  56
Overall Width :  292.96 μm
Overall Height :  375.82 μm
Overall Depth :  10.06 μm
Average Diameter :  0.25 μm
Total Length :  2986.74 μm
Total Surface :  2345.78 μm2
Total Volume :  146.61 μm3
Max Euclidean Distance :  266.36 μm
Max Path Distance :  406.46 μm
Max Branch Order :  7
Average Contraction :  0.84
Total Fragmentation :  3123
Partition Asymmetry :  0.33
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  56.86°
Average Bifurcation Angle Remote :  83.62°
Fractal Dimension :  1.06

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