8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_182089
Cell Name :  15May19_JA_S1_Slice2
Archive Name :  Keller
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Complete, Axon Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  40.0 days
Max Age :  45.0 days
Gender :  Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  somatosensory
Tertiary Brain Region :  layer 5
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Spiny
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  Biocytin, Streptavidin-Cy3
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  20x
Reconstruction Method :  Neurolucida
Date of Deposition :  2022-03-02
Date of Upload :  2022-04-12
Persistence Vector :  15May19_JA_S1_Slice2.pvec
Note :  When copulatory plugs were identified, we removed the sires and added saccharin 2% to the water hydration pouches, which were replenished weekly until litters were weaned.

Reference Article
Related Article Reference :  Perinatal Fentanyl Exposure Leads to Long-Lasting Impairments in Somatosensory Circuit Function and Behavior.

Measurements
Soma Surface :  2129.79 μm2
Number of Stems :  8
Number of Bifurcations :  28
Number of Branches :  64
Overall Width :  191.51 μm
Overall Height :  596.93 μm
Overall Depth :  150.52 μm
Average Diameter :  1.82 μm
Total Length :  3486.17 μm
Total Surface :  20018.5 μm2
Total Volume :  9951.37 μm3
Max Euclidean Distance :  477.48 μm
Max Path Distance :  534.87 μm
Max Branch Order :  9
Average Contraction :  0.91
Total Fragmentation :  961
Partition Asymmetry :  0.39
Average Rall's Ratio :  1.54
Average Bifurcation Angle Local :  71.23°
Average Bifurcation Angle Remote :  51.84°
Fractal Dimension :  1.02

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