8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_141390
Cell Name :  151215_p36_s2_s2_s_scaled
Archive Name :  Johenning
Species Name :  mouse
Strain :  C57BL/6N
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Moderate, Axon Incomplete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  36.0 days
Max Age :  36.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  olfactory cortex
Secondary Brain Region :  piriform
Tertiary Brain Region :  anterior, layer 2a
Primary Cell Class :  principal cell
Secondary Cell Class :  semilunar cell
Tertiary Cell Class :  Not reported
Original Format :  neuTube.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  transverse
Slice Thickness :  400  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  20x
Reconstruction Method :  neuTube
Date of Deposition :  2020-08-24
Date of Upload :  2020-10-13
Persistence Vector :  151215_p36_s2_s2_s_scaled.pvec
Note :  In the Morphology File (Original), the apical tree has layer-specific tags in the second SWC field: 4 for layer 2, 5 for layer 1b, and 6 for layer 1a

Reference Article
Related Article Reference :  Circuit-Specific Dendritic Development in the Piriform Cortex.

Measurements
Soma Surface :  462.27 μm2
Number of Stems :  3
Number of Bifurcations :  19
Number of Branches :  41
Overall Width :  342.54 μm
Overall Height :  356.03 μm
Overall Depth :  37.41 μm
Average Diameter :  1.94 μm
Total Length :  3139.81 μm
Total Surface :  19376.1 μm2
Total Volume :  9968.16 μm3
Max Euclidean Distance :  316.91 μm
Max Path Distance :  372.14 μm
Max Branch Order :  6
Average Contraction :  0.94
Total Fragmentation :  847
Partition Asymmetry :  0.41
Average Rall's Ratio :  1.95
Average Bifurcation Angle Local :  41.58°
Average Bifurcation Angle Remote :  38.39°
Fractal Dimension :  1.02

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