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Details about selected cell |
NeuroMorpho.Org ID : | NMO_141413 |
Cell Name : | 150416_p12_s1_d1_d_scaled |
Archive Name : | Johenning |
Species Name : | mouse |
Strain : | C57BL/6N |
Structural Domains : | Dendrites, Soma, No Axon |
Physical Integrity : | Dendrites Moderate |
Morphological Attributes : | Diameter, 3D, Angles |
Min Age : | 12.0 days
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Max Age : | 12.0 days
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Gender : |
Male/Female
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Min Weight : | Not reported
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Max Weight : | Not reported
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Development : | young |
Primary Brain Region : | olfactory cortex |
Secondary Brain Region : | piriform |
Tertiary Brain Region : | anterior, layer 2b |
Primary Cell Class : | principal cell |
Secondary Cell Class : | pyramidal |
Tertiary Cell Class : | Not reported |
Original Format : | neuTube.swc |
Experiment Protocol : | in vitro |
Experimental Condition : | Control |
Staining Method : | biocytin |
Slicing Direction : | transverse |
Slice Thickness : | 400
μm |
Tissue Shrinkage : |
Not reported
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Objective Type : | oil |
Magnification : | 20x |
Reconstruction Method : | neuTube |
Date of Deposition : | 2020-08-24 |
Date of Upload : | 2020-10-13 |
Persistence Vector : | 150416_p12_s1_d1_d_scaled.pvec |
Note : | In the Morphology File (Original), the apical tree has layer-specific tags in the second SWC field: 4 for layer 2, 5 for layer 1b, and 6 for layer 1a |
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Reference Article |
Related Article Reference : | Circuit-Specific Dendritic Development in the Piriform Cortex. |
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Measurements |
Soma Surface : |
522.9 μm2 |
Number of Stems : |
5 |
Number of Bifurcations : |
53 |
Number of Branches : |
111 |
Overall Width : |
325.77 μm |
Overall Height : |
539.37 μm |
Overall Depth : |
44.63 μm |
Average Diameter : |
1.79 μm |
Total Length : |
6304.66 μm |
Total Surface : |
35636.6 μm2 |
Total Volume : |
16884.9 μm3 |
Max Euclidean Distance : |
357.68 μm |
Max Path Distance : |
376.38 μm |
Max Branch Order : |
8 |
Average Contraction : |
0.95 |
Total Fragmentation : |
1693 |
Partition Asymmetry : |
0.48 |
Average Rall's Ratio : |
1.99 |
Average Bifurcation Angle Local : |
49.76° |
Average Bifurcation Angle Remote : |
44.21° |
Fractal Dimension : |
1.02 |
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