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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_141617 |
| Cell Name : | 14Feb2019-exp-5_53-rpt-188-1006 |
| Archive Name : | Glennon |
| Species Name : | rat |
| Strain : | Sprague-Dawley |
| Structural Domains : | Dendrites, Soma, No Axon |
| Physical Integrity : | Dendrites Complete |
| Morphological Attributes : | Diameter, 2D, Angles |
| Min Age : | 18.0 days
|
| Max Age : | 18.0 days
|
| Gender : |
Male/Female
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| Min Weight : | Not reported
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| Max Weight : | Not reported
|
| Development : | embryonic |
| Primary Brain Region : | neocortex |
| Secondary Brain Region : | Not reported |
| Tertiary Brain Region : | Not reported |
| Primary Cell Class : | interneuron |
| Secondary Cell Class : | Not reported |
| Tertiary Cell Class : | Not reported |
| Original Format : | Neurolucida.dat |
| Experiment Protocol : | culture |
| Experimental Condition : | Bridging integrator 1 (BIN1) knockdown |
| Staining Method : | enhanced green fluorescent protein |
| Slicing Direction : | Not applicable |
| Slice Thickness : | Not applicable
|
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | oil |
| Magnification : | 100x |
| Reconstruction Method : | Neurolucida |
| Date of Deposition : | 2020-09-01 |
| Date of Upload : | 2020-10-19 |
| Persistence Vector : | 14Feb2019-exp-5_53-rpt-188-1006.pvec |
| Note : | 19 DIV rat primary cortical neurons were transfected with lentivrus expressing BIN1 shRNA (TRCN0000088188) for 96 hours at 37C, after which time neurons were imaged or harvested. |
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| Reference Article |
| Related Article Reference : | Bridging Integrator-1 protein loss in Alzheimer's disease promotes synaptic tau accumulation and disrupts tau release. |
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| Measurements |
| Soma Surface : |
1421.86 μm2 |
| Number of Stems : |
9 |
| Number of Bifurcations : |
34 |
| Number of Branches : |
77 |
| Overall Width : |
144.37 μm |
| Overall Height : |
175.93 μm |
| Overall Depth : |
2.4 μm |
| Average Diameter : |
0.69 μm |
| Total Length : |
2115.92 μm |
| Total Surface : |
5170.13 μm2 |
| Total Volume : |
1400.05 μm3 |
| Max Euclidean Distance : |
103.69 μm |
| Max Path Distance : |
174.86 μm |
| Max Branch Order : |
7 |
| Average Contraction : |
0.92 |
| Total Fragmentation : |
4921 |
| Partition Asymmetry : |
0.53 |
| Average Rall's Ratio : |
3.58 |
| Average Bifurcation Angle Local : |
64.6° |
| Average Bifurcation Angle Remote : |
62.6° |
| Fractal Dimension : |
1.03 |
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