8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_60450
Cell Name :  134-20140328a
Archive Name :  Nolan
Species Name :  mouse
Strain :  Multiple
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  2.0 months
Max Age :  2.5 months
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young adult
Primary Brain Region :  entorhinal cortex
Secondary Brain Region :  medial
Tertiary Brain Region :  layer 5, layer 5a
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  Multiple
Slicing Direction :  Multiple
Slice Thickness :  400  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  Neurolucida
Date of Deposition :  2016-01-13
Date of Upload :  2017-03-30
Persistence Vector :  134-20140328a.pvec
Note :  Both WT and Sim1:Cre animals were used. Slice direction was either horizontal or parasagittal. Either streptavidin-Alexa488 or streptavidin-Texas Red were utilized as staining labels.

Reference Article
Related Article Reference :  Molecularly Defined Circuitry Reveals Input-Output Segregation in Deep Layers of the Medial Entorhinal Cortex.

Measurements
Soma Surface :  678.71 μm2
Number of Stems :  9
Number of Bifurcations :  18
Number of Branches :  45
Overall Width :  237.12 μm
Overall Height :  386.69 μm
Overall Depth :  61.58 μm
Average Diameter :  0.88 μm
Total Length :  2614.03 μm
Total Surface :  7473.64 μm2
Total Volume :  2087.93 μm3
Max Euclidean Distance :  285.31 μm
Max Path Distance :  302.23 μm
Max Branch Order :  5
Average Contraction :  0.88
Total Fragmentation :  692
Partition Asymmetry :  0.48
Average Rall's Ratio :  1.74
Average Bifurcation Angle Local :  74.47°
Average Bifurcation Angle Remote :  53.7°
Fractal Dimension :  1.03

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