8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_127341
Cell Name :  12-3_17
Archive Name :  La Barbera
Species Name :  rat
Strain :  BAC-synuclein transgenic
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  4.0 months
Max Age :  4.0 months
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  basal ganglia
Secondary Brain Region :  substantia nigra
Tertiary Brain Region :  pars compacta
Primary Cell Class :  Glia
Secondary Cell Class :  microglia
Tertiary Cell Class :  Iba1-positive
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  30  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2019-11-12
Date of Upload :  2020-06-29
Persistence Vector :  12-3_17.pvec
Note :  Parkinsons disease model carrying the full-length human wild-type SNCA locus, including all introns and exons and the upstream localized regulatory promoter sequences

Reference Article
Related Article Reference :  Blunting neuroinflammation with resolvin D1 prevents early pathology in a rat model of Parkinson's disease.

Measurements
Soma Surface :  217.34 μm2
Number of Stems :  5
Number of Bifurcations :  70
Number of Branches :  145
Overall Width :  48.68 μm
Overall Height :  30.57 μm
Overall Depth :  0.05 μm
Average Diameter :  0.08 μm
Total Length :  367.11 μm
Total Surface :  92.27 μm2
Total Volume :  1.85 μm3
Max Euclidean Distance :  30.61 μm
Max Path Distance :  35.44 μm
Max Branch Order :  14
Average Contraction :  0.91
Total Fragmentation :  901
Partition Asymmetry :  0.6
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  87.95°
Average Bifurcation Angle Remote :  86.77°
Fractal Dimension :  1.06

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website