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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_288811 |
| Cell Name : | 1198_20dpi-Set1-infec-S1-BS_i |
| Archive Name : | Figarella |
| Species Name : | mouse |
| Strain : | C57BL/6 |
| Structural Domains : | Processes, No Soma |
| Physical Integrity : | Processes Moderate |
| Morphological Attributes : | Diameter, 3D, Angles |
| Min Age : | 4.0 months
|
| Max Age : | 6.0 months
|
| Gender : |
Female
|
| Min Weight : | 25 grams
|
| Max Weight : | 25 grams
|
| Development : | adult |
| Primary Brain Region : | neocortex |
| Secondary Brain Region : | layer 3-4 |
| Tertiary Brain Region : | Not reported |
| Primary Cell Class : | Glia |
| Secondary Cell Class : | microglia |
| Tertiary Cell Class : | Iba1-positive |
| Original Format : | Imaris.ims |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Trypanosoma brucei infection |
| Staining Method : | immunostaining |
| Slicing Direction : | coronal |
| Slice Thickness : | 50
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | water |
| Magnification : | 20x , 40x |
| Reconstruction Method : | Imaris |
| Date of Deposition : | 2024-06-19 |
| Date of Upload : | 2024-10-11 |
| Persistence Vector : | 1198_20dpi-Set1-infec-S1-BS_i.pvec |
| Note : | This reconstruction was obtained 20 days post-injection (dpi) from a female infected with Trypanosoma brucei parasites in PBS containing 5 mM glucose. |
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| Reference Article |
| Related Article Reference : | Live imaging of microglia during sleeping sickness reveals early and heterogeneous inflammatory responses. |
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| Measurements |
| Soma Surface : |
N/A |
| Number of Stems : |
2 |
| Number of Bifurcations : |
7 |
| Number of Branches : |
16 |
| Overall Width : |
8.46 μm |
| Overall Height : |
19.39 μm |
| Overall Depth : |
12.32 μm |
| Average Diameter : |
0.59 μm |
| Total Length : |
75.64 μm |
| Total Surface : |
135.01 μm2 |
| Total Volume : |
23.78 μm3 |
| Max Euclidean Distance : |
20.57 μm |
| Max Path Distance : |
30.3 μm |
| Max Branch Order : |
6 |
| Average Contraction : |
0.87 |
| Total Fragmentation : |
427 |
| Partition Asymmetry : |
0.52 |
| Average Rall's Ratio : |
1.84 |
| Average Bifurcation Angle Local : |
87.39° |
| Average Bifurcation Angle Remote : |
99.93° |
| Fractal Dimension : |
1.06 |
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