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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_151959 |
| Cell Name : | 10_813-GM14-He-Plx-Mit-BNL16A-CA1Finished2b |
| Archive Name : | Acharya |
| Species Name : | mouse |
| Strain : | Tg(Thy1-EGFP)MJrs |
| Structural Domains : | Dendrites, Soma, No Axon |
| Physical Integrity : | Dendrites Moderate |
| Morphological Attributes : | Diameter, 3D, Angles |
| Min Age : | 8.0 months
|
| Max Age : | 9.0 months
|
| Gender : |
Male
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | adult |
| Primary Brain Region : | hippocampus |
| Secondary Brain Region : | CA1 |
| Tertiary Brain Region : | pyramidal layer |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | pyramidal |
| Tertiary Cell Class : | Not reported |
| Original Format : | Imaris.ims |
| Experiment Protocol : | in vivo |
| Experimental Condition : | body helium irradiation (30 cGy) + Microglia depletion (PLX5622) |
| Staining Method : | enhanced green fluorescent protein |
| Slicing Direction : | coronal |
| Slice Thickness : | 100
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | oil |
| Magnification : | 100x |
| Reconstruction Method : | Imaris |
| Date of Deposition : | 2020-12-16 |
| Date of Upload : | 2021-05-24 |
| Persistence Vector : | 10_813-GM14-He-Plx-Mit-BNL16A-CA1Finished2b.pvec |
| Note : | During irradiation, mice were loosely restrained in Lucite containers with breathing holes (3 x 1.5 x 1.5 in.) for exposure to 30 cGy of 400 MeV/n 4 He particles (dose rate = 15-25 cGy/min). Two weeks after irradiation mice were provided with PLX5622 chow (1200 PPM). All mice were maintained on their respective PLX5622 diet from 2 weeks postirradiation through the duration of all studies. |
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| Reference Article |
| Related Article Reference : | Mitigation of helium irradiation-induced brain injury by microglia depletion. |
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| Measurements |
| Soma Surface : |
160.67 μm2 |
| Number of Stems : |
4 |
| Number of Bifurcations : |
654 |
| Number of Branches : |
1312 |
| Overall Width : |
66.14 μm |
| Overall Height : |
264.09 μm |
| Overall Depth : |
52.52 μm |
| Average Diameter : |
0.88 μm |
| Total Length : |
2854.57 μm |
| Total Surface : |
7724.5 μm2 |
| Total Volume : |
1864.43 μm3 |
| Max Euclidean Distance : |
250.92 μm |
| Max Path Distance : |
290.42 μm |
| Max Branch Order : |
126 |
| Average Contraction : |
0.96 |
| Total Fragmentation : |
7357 |
| Partition Asymmetry : |
0.86 |
| Average Rall's Ratio : |
1.71 |
| Average Bifurcation Angle Local : |
61.12° |
| Average Bifurcation Angle Remote : |
82.98° |
| Fractal Dimension : |
1.02 |
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