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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_151497 |
| Cell Name : | 1-5_42 |
| Archive Name : | Shimell |
| Species Name : | rat |
| Strain : | Sprague-Dawley |
| Structural Domains : | Dendrites, No Soma, No Axon |
| Physical Integrity : | Dendrites Moderate |
| Morphological Attributes : | No Diameter, 2D, Angles |
| Min Age : | 18.0 days
|
| Max Age : | 18.0 days
|
| Gender : |
Male/Female
|
| Min Weight : | Not reported
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| Max Weight : | Not reported
|
| Development : | embryonic |
| Primary Brain Region : | hippocampus |
| Secondary Brain Region : | Not reported |
| Tertiary Brain Region : | Not reported |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | pyramidal |
| Tertiary Cell Class : | Not reported |
| Original Format : | NeuronJ.ndf |
| Experiment Protocol : | culture |
| Experimental Condition : | Ras shRNA + Zdhhc9 shRNA + Zdhhs9 |
| Staining Method : | enhanced green fluorescent protein |
| Slicing Direction : | Not applicable |
| Slice Thickness : | Not applicable
|
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | oil |
| Magnification : | 20x |
| Reconstruction Method : | NeuronJ |
| Date of Deposition : | 2020-04-20 |
| Date of Upload : | 2021-02-25 |
| Persistence Vector : | 1-5_42.pvec |
| Note : | Hippocampal neurons were transfected at 10DIV with eGFP, Zdhhc9 shRNA plus its known cofactor GCP16, Zdhhc9 inactive mutant (Zdhhs9), and Ras shRNA (1-3 mg of total plasmid DNA was added), and taken for analysis at 13 DIV. |
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| Reference Article |
| Related Article Reference : | The X-Linked Intellectual Disability Gene Zdhhc9 Is Essential for Dendrite Outgrowth and Inhibitory Synapse Formation. |
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| Measurements |
| Soma Surface : |
N/A |
| Number of Stems : |
1 |
| Number of Bifurcations : |
11 |
| Number of Branches : |
23 |
| Overall Width : |
140.32 μm |
| Overall Height : |
198.75 μm |
| Overall Depth : |
0 μm |
| Average Diameter : |
0.25 μm |
| Total Length : |
874.78 μm |
| Total Surface : |
687.05 μm2 |
| Total Volume : |
42.94 μm3 |
| Max Euclidean Distance : |
153.42 μm |
| Max Path Distance : |
274.32 μm |
| Max Branch Order : |
8 |
| Average Contraction : |
0.94 |
| Total Fragmentation : |
251 |
| Partition Asymmetry : |
0.63 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
73.9° |
| Average Bifurcation Angle Remote : |
85.74° |
| Fractal Dimension : |
1.02 |
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0
