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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_151742 |
| Cell Name : | 040neuron_SpatialGraph |
| Archive Name : | Lopez-Schier |
| Species Name : | zebrafish |
| Strain : | Tg(Myo6b:beta-actin-GFP; HGn39D) |
| Structural Domains : | No Dendrites, No Soma, Axon |
| Physical Integrity : | Axon Moderate |
| Morphological Attributes : | No Diameter, 3D, Angles |
| Min Age : | 6.0 days
|
| Max Age : | 7.0 days
|
| Gender : |
Male/Female
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | larval |
| Primary Brain Region : | brainstem |
| Secondary Brain Region : | hindbrain |
| Tertiary Brain Region : | lateral line, posterior, right |
| Primary Cell Class : | sensory |
| Secondary Cell Class : | plane polarized targeting |
| Tertiary Cell Class : | lateralis afferent, hair-cell, rostral orientation tuned |
| Original Format : | Simple Neurite Tracer.swc |
| Experiment Protocol : | in vivo |
| Experimental Condition : | double-transgenic |
| Staining Method : | mCherry |
| Slicing Direction : | whole mount |
| Slice Thickness : | Not applicable
|
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | dry |
| Magnification : | 40x |
| Reconstruction Method : | Simple Neurite Tracer |
| Date of Deposition : | 2021-04-02 |
| Date of Upload : | 2021-03-19 |
| Persistence Vector : | 040neuron_SpatialGraph.pvec |
|
|
| Reference Article |
| Related Article Reference : | A neuronal blueprint for directional mechanosensation in larval zebrafish. |
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| Measurements |
| Soma Surface : |
N/A |
| Number of Stems : |
1 |
| Number of Bifurcations : |
39 |
| Number of Branches : |
79 |
| Overall Width : |
520.93 μm |
| Overall Height : |
1086.55 μm |
| Overall Depth : |
29.6 μm |
| Average Diameter : |
4.84 μm |
| Total Length : |
3145.97 μm |
| Total Surface : |
48495.2 μm2 |
| Total Volume : |
134846 μm3 |
| Max Euclidean Distance : |
1051.32 μm |
| Max Path Distance : |
1734.31 μm |
| Max Branch Order : |
25 |
| Average Contraction : |
0.93 |
| Total Fragmentation : |
444 |
| Partition Asymmetry : |
0.78 |
| Average Rall's Ratio : |
2.25 |
| Average Bifurcation Angle Local : |
97.31° |
| Average Bifurcation Angle Remote : |
96.99° |
| Fractal Dimension : |
1.03 |
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