8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_07718
Cell Name :  028-cyan1
Archive Name :  Lu_Lichtman
Species Name :  mouse
Strain :  thy-1-YFP-16
Structural Domains :  No Dendrites, No Soma, Axon
Physical Integrity :  Axon Moderate
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  30.0 days
Max Age :  30.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  brainstem
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Motoneuron
Tertiary Cell Class :  Not reported
Original Format :  NeuronJ.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  yellow fluorescent protein
Slicing Direction :  Not reported
Slice Thickness :  20  μm
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  Not reported
Reconstruction Method :  NeuronJ
Date of Deposition :  2011-03-31
Date of Upload :  2012-05-17
Persistence Vector :  028-cyan1.pvec
Note :  The reconstruction does not contain the neuromuscular junctions, it stops at the base of the NMJs. 028-blue1,028-cyan1,028-cyan2,028-green1,028-green2,028-magenta1,028-magenta2,028-orange1,028-pink1,028-pink2,028-purple1,028-purple2,028-red1,028-red2, and 028-yellow1 belong to a single connectome 028

Reference Article
Related Article Reference :  The interscutularis muscle connectome

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  11
Number of Branches :  23
Overall Width :  1398.18 μm
Overall Height :  1936.65 μm
Overall Depth :  0 μm
Average Diameter :  1 μm
Total Length :  10017.6 μm
Total Surface :  31471.3 μm2
Total Volume :  7867.83 μm3
Max Euclidean Distance :  2024.07 μm
Max Path Distance :  2532.75 μm
Max Branch Order :  7
Average Contraction :  0.74
Total Fragmentation :  2968
Partition Asymmetry :  0.53
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  34.52°
Average Bifurcation Angle Remote :  75.4°
Fractal Dimension :  1.03

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