8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_07714
Cell Name :  027-red2
Archive Name :  Lu_Lichtman
Species Name :  mouse
Strain :  thy-1-YFP-16
Structural Domains :  No Dendrites, No Soma, Axon
Physical Integrity :  Axon Moderate
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  30.0 days
Max Age :  30.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  brainstem
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Motoneuron
Tertiary Cell Class :  Not reported
Original Format :  NeuronJ.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  yellow fluorescent protein
Slicing Direction :  Not reported
Slice Thickness :  20  μm
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  Not reported
Reconstruction Method :  NeuronJ
Date of Deposition :  2011-03-31
Date of Upload :  2012-05-17
Persistence Vector :  027-red2.pvec
Note :  The reconstruction does not contain the neuromuscular junctions, it stops at the base of the NMJs. 027-blue1,027-blue2,027-cyan1,027-cyan2,027-green1,027-green2,027-magenta1,027-magenta2,027-orange1,027-pink1,027-purple1,027-purple2,027-red1,027-red2,027-yellow1, and 027-yellow2 belong to a single connectome 027

Reference Article
Related Article Reference :  The interscutularis muscle connectome

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  14
Number of Branches :  29
Overall Width :  1613.07 μm
Overall Height :  2013.05 μm
Overall Depth :  0 μm
Average Diameter :  1 μm
Total Length :  10509 μm
Total Surface :  33015.1 μm2
Total Volume :  8253.76 μm3
Max Euclidean Distance :  2244.33 μm
Max Path Distance :  3159.1 μm
Max Branch Order :  7
Average Contraction :  0.87
Total Fragmentation :  3185
Partition Asymmetry :  0.5
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  46.15°
Average Bifurcation Angle Remote :  55.45°
Fractal Dimension :  1.02

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