8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_07697
Cell Name :  006-purple
Archive Name :  Lu_Lichtman,DIADEM
Species Name :  mouse
Strain :  thy-1-YFP-16
Structural Domains :  No Dendrites, No Soma, Axon
Physical Integrity :  Axon Moderate
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  30.0 days
Max Age :  30.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  brainstem
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Motoneuron
Tertiary Cell Class :  Not reported
Original Format :  NeuronJ.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  yellow fluorescent protein
Slicing Direction :  Not reported
Slice Thickness :  20  μm
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  Not reported
Reconstruction Method :  NeuronJ
Date of Deposition :  2011-03-31
Date of Upload :  2012-05-17
Persistence Vector :  006-purple.pvec
Note :  The reconstruction does not contain the neuromuscular junctions, it stops at the base of the NMJs. 006-blue1,006-blue2,006-cyan1,006-cyan2,006-green1,006-green2,006-magenta1,006-orange2,006-pink,006-purple,006-red1,006-red2, and 006-yellow belong to a single connectome 006

Reference Article
Related Article Reference :  The interscutularis muscle connectome

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  10
Number of Branches :  21
Overall Width :  1201.41 μm
Overall Height :  1896.64 μm
Overall Depth :  0 μm
Average Diameter :  1 μm
Total Length :  9348.46 μm
Total Surface :  29369.1 μm2
Total Volume :  7342.27 μm3
Max Euclidean Distance :  2092.4 μm
Max Path Distance :  2537.91 μm
Max Branch Order :  7
Average Contraction :  0.88
Total Fragmentation :  2770
Partition Asymmetry :  0.54
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  50.8°
Average Bifurcation Angle Remote :  57.02°
Fractal Dimension :  1.02

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