# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-9_z00_ch00_2.ims.swc.swc created with StdSwc version 1.31 on 4/16/18.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-9_z00_ch00_2.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  345.0  227.3  21.75
4.3  Radius of line 10 at 2.155 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  338.1  229.45  21.41
4.3  Radius of line 11 at 2.155 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  337.6  229.3  21.37
4.5  Radius of terminal line 1374 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  64.34  442.6  9.75
4.5  Radius of terminal line 1587 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  31.42  460.2  12.75
4.5  Radius of terminal line 1671 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  205.3  395.4  13.25
4.5  Radius of terminal line 1798 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  241.3  370.3  16.25
4.5  Radius of terminal line 1922 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  128.4  342.1  13.75
4.5  Radius of terminal line 1996 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  168.1  374.7  9.75
4.5  Radius of terminal line 2089 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  209.2  310.4  10.25
4.5  Radius of terminal line 2153 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.0  318.4  24.25
4.5  Radius of terminal line 2225 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  210.1  360.0  8.75
4.5  Radius of terminal line 2342 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  280.5  324.7  26.25
4.5  Radius of terminal line 2522 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  194.2  406.6  13.75
4.5  Radius of terminal line 2631 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  255.1  255.3  19.25
4.5  Radius of terminal line 2717 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  262.9  241.3  15.25
4.5  Radius of terminal line 2919 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  204.9  387.9  15.75
4.5  Radius of terminal line 3147 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  228.5  407.9  12.25
4.5  Radius of terminal line 3341 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  179.4  310.6  15.75
4.5  Radius of terminal line 3382 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  307.0  284.69  25.75
4.5  Radius of terminal line 3594 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  188.9  332.3  23.75
4.5  Radius of terminal line 3643 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  288.19  269.1  17.25
4.5  Radius of terminal line 3769 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.5  288.9  11.75
2.5  Seg length ending at pt. 2 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  345.0  227.3  21.75
2.4  Seg length ending at pt. 22 >= 6.0 stdevs above mean at 2.6458.  (no action taken)
     B1      X, Y, Z:  339.3  219.5  24.23
2.4  Seg length ending at pt. 129 >= 6.0 stdevs above mean at 2.4058.  (no action taken)
     B1      X, Y, Z:  342.4  212.1  24.96
2.4  Seg length ending at pt. 187 >= 6.0 stdevs above mean at 2.4024.  (no action taken)
     B1      X, Y, Z:  345.7  206.6  25.42
2.4  Seg length ending at pt. 299 >= 6.0 stdevs above mean at 2.4581.  (no action taken)
     B1      X, Y, Z:  336.5  219.3  19.8
2.4  Seg length ending at pt. 324 >= 6.0 stdevs above mean at 2.2434.  (no action taken)
     B1      X, Y, Z:  340.5  214.3  19.51
2.4  Seg length ending at pt. 541 >= 6.0 stdevs above mean at 2.1172.  (no action taken)
     B1      X, Y, Z:  363.0  235.6  21.26
2.4  Seg length ending at pt. 3770 >= 6.0 stdevs above mean at 2.2308.  (no action taken)
     B1      X, Y, Z:  347.0  226.5  21.17
2.4  Seg length ending at pt. 3802 >= 6.0 stdevs above mean at 2.099.  (no action taken)
     B1      X, Y, Z:  376.9  226.8  14.3
2.4  Seg length ending at pt. 3810 >= 6.0 stdevs above mean at 3.0004.  (no action taken)
     B1      X, Y, Z:  354.1  228.7  19.89
2.4  Seg length ending at pt. 3814 >= 6.0 stdevs above mean at 2.1685.  (no action taken)
     B1      X, Y, Z:  358.7  232.2  19.1
2.4  Seg length ending at pt. 3822 >= 6.0 stdevs above mean at 2.2633.  (no action taken)
     B1      X, Y, Z:  367.8  236.4  19.3
2.4  Seg length ending at pt. 3840 >= 6.0 stdevs above mean at 2.4445.  (no action taken)
     B1      X, Y, Z:  386.9  242.9  18.53
2.4  Seg length ending at pt. 3936 >= 6.0 stdevs above mean at 2.4167.  (no action taken)
     B1      X, Y, Z:  392.4  244.6  19.53
2.4  Seg length ending at pt. 3974 >= 6.0 stdevs above mean at 2.2023.  (no action taken)
     B1      X, Y, Z:  428.5  257.6  18.74
2.4  Seg length ending at pt. 3988 >= 6.0 stdevs above mean at 2.1521.  (no action taken)
     B1      X, Y, Z:  353.2  225.8  20.87
2.4  Seg length ending at pt. 4161 >= 6.0 stdevs above mean at 2.4212.  (no action taken)
     B1      X, Y, Z:  370.8  223.4  21.78
2.4  Seg length ending at pt. 4226 >= 6.0 stdevs above mean at 2.1846.  (no action taken)
     B1      X, Y, Z:  366.1  223.3  21.78
2.4  Seg length ending at pt. 4392 >= 6.0 stdevs above mean at 2.1595.  (no action taken)
     B1      X, Y, Z:  358.0  223.2  20.67
2.4  Seg length ending at pt. 4522 >= 6.0 stdevs above mean at 2.4787.  (no action taken)
     B1      X, Y, Z:  360.6  216.5  20.64
2.4  Seg length ending at pt. 697 >= 6.0 stdevs above mean at 10.3773.  (no action taken)
     B1      X, Y, Z:  332.4  237.8  23.75
1.2  Line 10 of type 4 links to incorrect type 3.  (no action taken)
     B1      X, Y, Z:  338.1  229.45  21.41
1.2  Line 12 of type 3 links to incorrect type 4.  (no action taken)
     B1      X, Y, Z:  337.2  229.05  21.31
2.7  Line 3839 of rad 2.155 is an included side branch.  (removed)
     A      X, Y, Z:  385.6  242.7  17.85
2.7  Line 3643 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  288.19  269.1  17.25
2.6  Line 13 and line 290 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  336.8  228.8  21.25
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 46
Number of type B2 irregularities = 0
Number of type C irregularities = 0
