# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-7_z00_ch00_2.ims.swc.swc created with StdSwc version 1.31 on 4/16/18.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-7_z00_ch00_2.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 4.  (no action taken)
     B1      X, Y, Z:  20.73  423.7  6.08
4.3  Radius of line 2 at 3.808 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  21.28  422.4  6.62
4.3  Radius of line 3 at 3.797 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  21.87  421.3  7.36
4.3  Radius of line 4 at 3.786 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  22.71  420.3  8.08
4.3  Radius of line 5 at 3.774 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  23.71  419.2  8.73
4.3  Radius of line 6 at 3.762 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  24.75  418.2  9.44
4.3  Radius of line 7 at 3.75 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  26.05  417.6  10.14
4.3  Radius of line 8 at 3.738 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  27.6  417.6  10.73
4.3  Radius of line 9 at 3.725 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  29.1  417.6  11.47
4.3  Radius of line 10 at 3.713 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  30.41  417.2  12.39
4.3  Radius of line 11 at 3.701 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  31.51  416.6  13.4
4.3  Radius of line 12 at 3.688 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  32.34  416.1  14.54
4.3  Radius of line 13 at 3.675 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  32.92  415.9  15.83
4.3  Radius of line 14 at 3.66 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  33.32  416.2  17.17
4.3  Radius of line 15 at 3.637 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  33.77  416.5  18.46
4.3  Radius of line 16 at 3.595 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  34.63  416.8  19.57
4.3  Radius of line 17 at 3.511 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  36.0  417.3  20.23
4.3  Radius of line 18 at 3.355 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  37.75  418.0  20.44
2.5  Seg length ending at pt. 3794 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  301.53  209.52  15.25
2.4  Seg length ending at pt. 4566 >= 6.0 stdevs above mean at 3.2924.  (no action taken)
     B1      X, Y, Z:  378.4  185.8  13.74
2.4  Seg length ending at pt. 4601 >= 6.0 stdevs above mean at 3.015.  (no action taken)
     B1      X, Y, Z:  415.5  176.4  12.22
2.5  Seg length ending at pt. 3795 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  301.5  209.5  15.25
2.4  Seg length ending at pt. 3792 >= 6.0 stdevs above mean at 10.4559.  (no action taken)
     B1      X, Y, Z:  300.69  208.7  15.16
1.2  Line 3793 of type 3 links to incorrect type 4.  (no action taken)
     B1      X, Y, Z:  301.5  209.5  15.25
1.2  Line 5357 of type 3 links to incorrect type 4.  (no action taken)
     B1      X, Y, Z:  300.3  207.8  15.08
2.7  Line 4565 of rad 2.155 is an included side branch.  (removed)
     A      X, Y, Z:  376.1  186.6  14.25
2.7  Line 1639 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  192.8  318.6  13.87
2.7  Line 2556 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  213.9  296.6  12.45
2.6  Line 2438 and line 2514 have the same coordinates.  (second line removed)
     A      X, Y, Z:  229.3  281.5  14.25
2.6  Line 3172 and line 3402 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  262.6  249.4  18.07
4.4  Line 3792 of rad 2.155 links to 3791 of rad 0.914.  (no action taken)
     B1      X, Y, Z:  300.69  208.7  15.16
4.4  Line 3804 of rad 1.845 links to 3803 of rad 0.914.  (no action taken)
     B1      X, Y, Z:  308.9  213.4  12.38
2.1  Line 3793 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  301.5  209.5  15.25
 
 


Number of type A irregularities = 6
Number of type B1 irregularities = 27
Number of type B2 irregularities = 0
Number of type C irregularities = 0
