# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-6_z00_ch00_2.ims.swc.swc created with StdSwc version 1.31 on 4/16/18.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-6_z00_ch00_2.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  364.5  213.4  13.25
2.5  Seg length ending at pt. 2 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  364.5  213.4  13.25
2.4  Seg length ending at pt. 3 >= 6.0 stdevs above mean at 1.2659.  (no action taken)
     B1      X, Y, Z:  365.6  214.0  13.07
2.4  Seg length ending at pt. 293 >= 6.0 stdevs above mean at 1.1943.  (no action taken)
     B1      X, Y, Z:  404.9  221.7  14.33
2.4  Seg length ending at pt. 396 >= 6.0 stdevs above mean at 1.1705.  (no action taken)
     B1      X, Y, Z:  452.2  228.5  10.74
2.5  Seg length ending at pt. 426 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  358.6  210.9  13.25
2.5  Seg length ending at pt. 428 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  358.63  210.92  13.25
2.4  Seg length ending at pt. 3604 >= 6.0 stdevs above mean at 1.2124.  (no action taken)
     B1      X, Y, Z:  365.7  208.4  7.85
2.4  Seg length ending at pt. 3680 >= 6.0 stdevs above mean at 1.3814.  (no action taken)
     B1      X, Y, Z:  398.9  188.6  12.54
2.5  Seg length ending at pt. 3759 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  358.6  210.9  13.25
2.4  Seg length ending at pt. 4012 >= 6.0 stdevs above mean at 1.3625.  (no action taken)
     B1      X, Y, Z:  353.2  190.9  13.46
2.4  Seg length ending at pt. 4236 >= 6.0 stdevs above mean at 83.6356.  (no action taken)
     B1      X, Y, Z:  358.7  209.7  13.33
2.4  Seg length ending at pt. 4689 >= 6.0 stdevs above mean at 1.2978.  (no action taken)
     B1      X, Y, Z:  379.2  201.7  14.13
2.5  Seg length ending at pt. 4866 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  358.6  210.9  13.25
2.4  Seg length ending at pt. 4869 >= 6.0 stdevs above mean at 1.1705.  (no action taken)
     B1      X, Y, Z:  361.2  208.9  13.53
2.5  Seg length ending at pt. 5585 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  358.6  210.9  13.25
2.4  Seg length ending at pt. 5586 >= 6.0 stdevs above mean at 1.172.  (no action taken)
     B1      X, Y, Z:  359.0  209.8  13.31
2.5  Seg length ending at pt. 427 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  358.61  210.91  13.25
2.5  Seg length ending at pt. 3760 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  358.6  210.9  13.25
2.5  Seg length ending at pt. 429 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  358.6  210.9  13.25
2.4  Seg length ending at pt. 634 >= 6.0 stdevs above mean at 12.9239.  (no action taken)
     B1      X, Y, Z:  349.4  221.1  13.25
1.2  Line 431 of type 4 links to incorrect type 3      (type changed to 3)
     A       X, Y, Z:  357.4  211.1  11.51
1.2  Line 634 of type 4 links to incorrect type 3.  (no action taken)
     B1      X, Y, Z:  349.4  221.1  13.25
2.7  Line 3679 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  398.5  189.1  11.75
2.1  Line 425 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  358.6  210.9  13.25
 
 


Number of type A irregularities = 11
Number of type B1 irregularities = 14
Number of type B2 irregularities = 0
Number of type C irregularities = 0
