# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-6_z00_ch00_1.ims.swc.swc created with StdSwc version 1.31 on 4/16/18.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-6_z00_ch00_1.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  322.8  205.2  17.25
2.5  Seg length ending at pt. 2 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  322.8  205.2  17.25
2.4  Seg length ending at pt. 11 >= 6.0 stdevs above mean at 1.0268.  (no action taken)
     B1      X, Y, Z:  322.9  214.2  16.96
2.4  Seg length ending at pt. 12 >= 6.0 stdevs above mean at 1.1019.  (no action taken)
     B1      X, Y, Z:  322.3  215.1  16.75
2.4  Seg length ending at pt. 16 >= 6.0 stdevs above mean at 1.1437.  (no action taken)
     B1      X, Y, Z:  323.4  213.1  16.58
2.4  Seg length ending at pt. 17 >= 6.0 stdevs above mean at 1.1192.  (no action taken)
     B1      X, Y, Z:  324.4  212.6  16.53
2.4  Seg length ending at pt. 18 >= 6.0 stdevs above mean at 1.0448.  (no action taken)
     B1      X, Y, Z:  325.4  212.3  16.49
2.4  Seg length ending at pt. 27 >= 6.0 stdevs above mean at 1.1161.  (no action taken)
     B1      X, Y, Z:  334.3  212.0  16.41
2.4  Seg length ending at pt. 109 >= 6.0 stdevs above mean at 1.055.  (no action taken)
     B1      X, Y, Z:  339.8  209.7  16.28
2.4  Seg length ending at pt. 1085 >= 6.0 stdevs above mean at 1.0296.  (no action taken)
     B1      X, Y, Z:  438.5  145.3  8.55
2.4  Seg length ending at pt. 1119 >= 6.0 stdevs above mean at 1.4526.  (no action taken)
     B1      X, Y, Z:  360.6  197.7  13.14
2.4  Seg length ending at pt. 1229 >= 6.0 stdevs above mean at 1.2035.  (no action taken)
     B1      X, Y, Z:  370.2  245.7  10.47
2.4  Seg length ending at pt. 1297 >= 6.0 stdevs above mean at 1.1472.  (no action taken)
     B1      X, Y, Z:  342.8  208.9  16.16
2.4  Seg length ending at pt. 1406 >= 6.0 stdevs above mean at 1.2147.  (no action taken)
     B1      X, Y, Z:  397.7  215.2  11.91
2.4  Seg length ending at pt. 1538 >= 6.0 stdevs above mean at 1.2208.  (no action taken)
     B1      X, Y, Z:  462.9  218.5  9.27
2.4  Seg length ending at pt. 1888 >= 6.0 stdevs above mean at 1.0377.  (no action taken)
     B1      X, Y, Z:  360.4  216.0  16.14
2.4  Seg length ending at pt. 2084 >= 6.0 stdevs above mean at 1.3426.  (no action taken)
     B1      X, Y, Z:  461.6  229.7  18.42
2.4  Seg length ending at pt. 2173 >= 6.0 stdevs above mean at 1.2133.  (no action taken)
     B1      X, Y, Z:  386.0  216.0  17.6
2.4  Seg length ending at pt. 2427 >= 6.0 stdevs above mean at 1.4071.  (no action taken)
     B1      X, Y, Z:  352.0  214.0  15.38
2.4  Seg length ending at pt. 2440 >= 6.0 stdevs above mean at 1.0521.  (no action taken)
     B1      X, Y, Z:  356.9  218.5  12.88
2.4  Seg length ending at pt. 7051 >= 6.0 stdevs above mean at 1.0319.  (no action taken)
     B1      X, Y, Z:  323.2  214.6  16.82
2.4  Seg length ending at pt. 7053 >= 6.0 stdevs above mean at 1.03.  (no action taken)
     B1      X, Y, Z:  324.4  213.0  16.8
2.4  Seg length ending at pt. 7063 >= 6.0 stdevs above mean at 1.0419.  (no action taken)
     B1      X, Y, Z:  328.2  204.6  16.41
2.4  Seg length ending at pt. 7256 >= 6.0 stdevs above mean at 1.1225.  (no action taken)
     B1      X, Y, Z:  327.8  184.1  13.98
2.4  Seg length ending at pt. 7272 >= 6.0 stdevs above mean at 1.0257.  (no action taken)
     B1      X, Y, Z:  322.8  178.4  11.14
2.4  Seg length ending at pt. 7827 >= 6.0 stdevs above mean at 1.5108.  (no action taken)
     B1      X, Y, Z:  362.7  176.5  18.96
2.4  Seg length ending at pt. 7873 >= 6.0 stdevs above mean at 1.1666.  (no action taken)
     B1      X, Y, Z:  374.6  155.8  22.05
2.5  Seg length ending at pt. 8030 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  322.3  215.1  16.75
2.4  Seg length ending at pt. 8031 >= 6.0 stdevs above mean at 1.1694.  (no action taken)
     B1      X, Y, Z:  323.0  214.2  16.49
2.4  Seg length ending at pt. 8032 >= 6.0 stdevs above mean at 1.0619.  (no action taken)
     B1      X, Y, Z:  323.9  213.7  16.23
2.4  Seg length ending at pt. 8033 >= 6.0 stdevs above mean at 1.1358.  (no action taken)
     B1      X, Y, Z:  325.0  213.5  16.03
2.4  Seg length ending at pt. 8038 >= 6.0 stdevs above mean at 1.1437.  (no action taken)
     B1      X, Y, Z:  330.1  213.7  15.38
2.4  Seg length ending at pt. 8040 >= 6.0 stdevs above mean at 1.0308.  (no action taken)
     B1      X, Y, Z:  331.9  214.6  15.25
2.4  Seg length ending at pt. 8064 >= 6.0 stdevs above mean at 1.1309.  (no action taken)
     B1      X, Y, Z:  322.6  204.1  17.42
2.4  Seg length ending at pt. 8345 >= 6.0 stdevs above mean at 1.0291.  (no action taken)
     B1      X, Y, Z:  305.3  172.9  20.25
2.4  Seg length ending at pt. 8505 >= 6.0 stdevs above mean at 1.0854.  (no action taken)
     B1      X, Y, Z:  322.6  195.5  17.69
2.4  Seg length ending at pt. 8750 >= 6.0 stdevs above mean at 1.2007.  (no action taken)
     B1      X, Y, Z:  324.2  170.4  19.08
2.4  Seg length ending at pt. 9201 >= 6.0 stdevs above mean at 1.4526.  (no action taken)
     B1      X, Y, Z:  323.8  196.4  18.12
2.4  Seg length ending at pt. 9433 >= 6.0 stdevs above mean at 1.1414.  (no action taken)
     B1      X, Y, Z:  373.3  149.0  25.62
2.4  Seg length ending at pt. 9554 >= 6.0 stdevs above mean at 1.1574.  (no action taken)
     B1      X, Y, Z:  359.8  165.7  23.94
2.4  Seg length ending at pt. 2486 >= 6.0 stdevs above mean at 14.1072.  (no action taken)
     B1      X, Y, Z:  314.4  226.1  16.75
1.2  Line 2486 of type 4 links to incorrect type 3.  (no action taken)
     B1      X, Y, Z:  314.4  226.1  16.75
1.2  Line 7050 of type 4 links to incorrect type 3      (type changed to 3)
     A       X, Y, Z:  322.3  215.1  16.75
2.7  Line 1167 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  375.3  213.9  12.25
2.7  Line 2083 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  460.9  229.3  18.25
2.7  Line 6761 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  255.1  296.0  21.25
2.6  Line 12 and line 7050 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  322.3  215.1  16.75
 
 


Number of type A irregularities = 6
Number of type B1 irregularities = 41
Number of type B2 irregularities = 0
Number of type C irregularities = 0
