# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-6_z00_ch00.ims.swc.swc created with StdSwc version 1.31 on 4/16/18.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-6_z00_ch00.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  312.3  237.7  16.1
4.3  Radius of line 3 at 2.155 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  311.51  238.11  15.75
4.3  Radius of line 4 at 2.155 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  311.53  238.12  15.75
4.3  Radius of line 5 at 2.155 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  311.5  238.1  15.75
4.3  Radius of line 2167 at 2.155 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  311.5  238.1  15.75
2.5  Seg length ending at pt. 14 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  309.4  231.1  17.25
2.5  Seg length ending at pt. 1341 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  311.5  238.1  15.75
2.4  Seg length ending at pt. 2038 >= 6.0 stdevs above mean at 2.4151.  (no action taken)
     B1      X, Y, Z:  392.5  210.7  16.96
2.4  Seg length ending at pt. 2100 >= 6.0 stdevs above mean at 2.4233.  (no action taken)
     B1      X, Y, Z:  333.6  235.2  19.55
2.4  Seg length ending at pt. 7364 >= 6.0 stdevs above mean at 2.5135.  (no action taken)
     B1      X, Y, Z:  357.3  177.8  24.51
2.4  Seg length ending at pt. 8514 >= 6.0 stdevs above mean at 2.7354.  (no action taken)
     B1      X, Y, Z:  390.3  154.9  12.25
2.5  Seg length ending at pt. 3 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  311.51  238.11  15.75
2.5  Seg length ending at pt. 5 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  311.5  238.1  15.75
2.5  Seg length ending at pt. 2167 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  311.5  238.1  15.75
2.4  Seg length ending at pt. 2168 >= 6.0 stdevs above mean at 8.6493.  (no action taken)
     B1      X, Y, Z:  304.9  243.6  16.75
2.4  Seg length ending at pt. 2340 >= 6.0 stdevs above mean at 1.4765.  (no action taken)
     B1      X, Y, Z:  250.3  318.1  16.46
2.4  Seg length ending at pt. 4262 >= 6.0 stdevs above mean at 1.5448.  (no action taken)
     B1      X, Y, Z:  139.3  429.1  18.83
2.4  Seg length ending at pt. 4322 >= 6.0 stdevs above mean at 1.562.  (no action taken)
     B1      X, Y, Z:  156.0  441.0  16.46
2.4  Seg length ending at pt. 4566 >= 6.0 stdevs above mean at 1.4246.  (no action taken)
     B1      X, Y, Z:  184.1  423.6  15.82
2.5  Seg length ending at pt. 4 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  311.53  238.12  15.75
1.2  Line 2168 of type 4 links to incorrect type 3.  (no action taken)
     B1      X, Y, Z:  304.9  243.6  16.75
2.7  Line 7817 of rad 2.155 is an included side branch.  (removed)
     A      X, Y, Z:  400.7  221.6  17.4
2.7  Line 8238 of rad 1.006 is an included side branch.  (removed)
     A      X, Y, Z:  330.7  146.5  12.97
2.7  Line 8513 of rad 2.155 is an included side branch.  (removed)
     A      X, Y, Z:  388.7  155.6  12.25
2.7  Line 2766 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  253.8  322.2  16.64
4.4  Line 2038 of rad 1.845 links to 2037 of rad 0.914.  (no action taken)
     B1      X, Y, Z:  392.5  210.7  16.96
4.4  Line 2100 of rad 1.845 links to 1371 of rad 0.914.  (no action taken)
     B1      X, Y, Z:  333.6  235.2  19.55
2.1  Line 2 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  311.5  238.1  15.75
 
 


Number of type A irregularities = 10
Number of type B1 irregularities = 18
Number of type B2 irregularities = 0
Number of type C irregularities = 0
