# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-5_z00_ch00_2.ims.swc.swc created with StdSwc version 1.31 on 4/16/18.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-5_z00_ch00_2.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 4.  (no action taken)
     B1      X, Y, Z:  252.6  306.4  17.08
2.4  Seg length ending at pt. 3801 >= 6.0 stdevs above mean at 1.2562.  (no action taken)
     B1      X, Y, Z:  433.4  124.8  10.34
2.4  Seg length ending at pt. 3845 >= 6.0 stdevs above mean at 1.465.  (no action taken)
     B1      X, Y, Z:  360.8  171.5  13.91
2.4  Seg length ending at pt. 4245 >= 6.0 stdevs above mean at 1.2389.  (no action taken)
     B1      X, Y, Z:  294.1  160.2  17.51
2.5  Seg length ending at pt. 5344 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  320.8  200.4  14.75
2.4  Seg length ending at pt. 5354 >= 6.0 stdevs above mean at 1.2816.  (no action taken)
     B1      X, Y, Z:  323.4  190.7  14.9
2.4  Seg length ending at pt. 5694 >= 6.0 stdevs above mean at 1.2983.  (no action taken)
     B1      X, Y, Z:  333.3  178.1  14.65
2.4  Seg length ending at pt. 5747 >= 6.0 stdevs above mean at 1.3126.  (no action taken)
     B1      X, Y, Z:  337.8  151.59  15.37
2.4  Seg length ending at pt. 6102 >= 6.0 stdevs above mean at 1.2556.  (no action taken)
     B1      X, Y, Z:  387.0  88.93  16.76
2.4  Seg length ending at pt. 6554 >= 6.0 stdevs above mean at 1.276.  (no action taken)
     B1      X, Y, Z:  428.6  127.1  17.66
2.4  Seg length ending at pt. 6870 >= 6.0 stdevs above mean at 1.245.  (no action taken)
     B1      X, Y, Z:  345.6  152.7  24.05
2.4  Seg length ending at pt. 7808 >= 6.0 stdevs above mean at 2.1159.  (no action taken)
     B1      X, Y, Z:  366.9  211.3  15.25
2.4  Seg length ending at pt. 7809 >= 6.0 stdevs above mean at 1.4186.  (no action taken)
     B1      X, Y, Z:  368.1  211.2  14.5
2.4  Seg length ending at pt. 7813 >= 6.0 stdevs above mean at 1.2845.  (no action taken)
     B1      X, Y, Z:  371.4  212.6  15.25
2.4  Seg length ending at pt. 7815 >= 6.0 stdevs above mean at 1.359.  (no action taken)
     B1      X, Y, Z:  372.5  212.7  15.13
2.4  Seg length ending at pt. 7816 >= 6.0 stdevs above mean at 1.4228.  (no action taken)
     B1      X, Y, Z:  373.6  212.5  14.25
2.4  Seg length ending at pt. 7823 >= 6.0 stdevs above mean at 2.0771.  (no action taken)
     B1      X, Y, Z:  379.2  214.4  16.12
2.4  Seg length ending at pt. 7824 >= 6.0 stdevs above mean at 1.6895.  (no action taken)
     B1      X, Y, Z:  380.4  214.0  15.0
2.4  Seg length ending at pt. 7826 >= 6.0 stdevs above mean at 2.0767.  (no action taken)
     B1      X, Y, Z:  380.3  215.4  17.25
2.4  Seg length ending at pt. 7827 >= 6.0 stdevs above mean at 1.537.  (no action taken)
     B1      X, Y, Z:  379.9  216.2  18.5
2.4  Seg length ending at pt. 7831 >= 6.0 stdevs above mean at 2.4793.  (no action taken)
     B1      X, Y, Z:  384.3  216.7  16.87
2.4  Seg length ending at pt. 7832 >= 6.0 stdevs above mean at 2.4727.  (no action taken)
     B1      X, Y, Z:  386.1  216.2  15.25
2.4  Seg length ending at pt. 7833 >= 6.0 stdevs above mean at 1.2666.  (no action taken)
     B1      X, Y, Z:  387.2  216.1  14.63
2.4  Seg length ending at pt. 7835 >= 6.0 stdevs above mean at 1.2597.  (no action taken)
     B1      X, Y, Z:  389.3  216.3  13.88
2.4  Seg length ending at pt. 7836 >= 6.0 stdevs above mean at 1.3663.  (no action taken)
     B1      X, Y, Z:  390.6  216.7  13.75
2.4  Seg length ending at pt. 7837 >= 6.0 stdevs above mean at 1.4368.  (no action taken)
     B1      X, Y, Z:  391.9  217.3  13.63
2.4  Seg length ending at pt. 7852 >= 6.0 stdevs above mean at 1.323.  (no action taken)
     B1      X, Y, Z:  338.8  202.9  16.14
2.4  Seg length ending at pt. 8157 >= 6.0 stdevs above mean at 1.5311.  (no action taken)
     B1      X, Y, Z:  451.0  185.0  16.21
2.4  Seg length ending at pt. 8469 >= 6.0 stdevs above mean at 1.524.  (no action taken)
     B1      X, Y, Z:  430.5  141.3  18.05
2.5  Seg length ending at pt. 215 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  263.5  234.6  20.17
2.5  Seg length ending at pt. 449 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  277.1  233.5  19.01
2.4  Seg length ending at pt. 2235 >= 6.0 stdevs above mean at 2.7856.  (no action taken)
     B1      X, Y, Z:  187.1  272.69  17.01
2.4  Seg length ending at pt. 2353 >= 6.0 stdevs above mean at 2.9029.  (no action taken)
     B1      X, Y, Z:  250.3  259.0  15.0
2.4  Seg length ending at pt. 3010 >= 6.0 stdevs above mean at 12.4165.  (no action taken)
     B1      X, Y, Z:  320.8  200.4  14.75
2.5  Seg length ending at pt. 3011 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  320.83  200.42  14.75
2.5  Seg length ending at pt. 3936 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  320.8  200.4  14.75
2.5  Seg length ending at pt. 3012 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  320.81  200.41  14.75
1.2  Line 3013 of type 3 links to incorrect type 4.  (no action taken)
     B1      X, Y, Z:  321.8  200.8  14.87
1.2  Line 3937 of type 3 links to incorrect type 4.  (no action taken)
     B1      X, Y, Z:  320.4  199.6  14.79
1.2  Line 5345 of type 3 links to incorrect type 4.  (no action taken)
     B1      X, Y, Z:  320.2  199.5  14.76
1.2  Line 7046 of type 3 links to incorrect type 4.  (no action taken)
     B1      X, Y, Z:  321.6  199.8  14.62
2.7  Line 3275 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  462.0  167.3  11.25
2.7  Line 3311 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  398.1  173.9  13.75
2.7  Line 3593 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  398.8  169.5  8.25
2.7  Line 4281 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  294.69  141.4  17.75
2.7  Line 4471 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  309.8  47.89  22.25
2.7  Line 5746 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  337.1  152.2  15.25
2.7  Line 6421 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  423.1  94.62  17.75
2.7  Line 73 of rad 2.155 is an included side branch.  (removed)
     A      X, Y, Z:  253.6  305.3  17.25
2.7  Line 587 of rad 2.155 is an included side branch.  (removed)
     A      X, Y, Z:  252.5  244.3  21.25
2.6  Line 5081 and line 5286 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  341.3  50.1  20.03
2.6  Line 5083 and line 5288 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  341.9  49.21  20.01
2.6  Line 5562 and line 6697 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  354.8  167.9  21.21
2.6  Line 5563 and line 6698 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  355.3  167.7  21.25
2.6  Line 5564 and line 6699 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  355.8  167.6  21.28
2.6  Line 5589 and line 6724 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  366.8  161.9  22.94
2.6  Line 5590 and line 6725 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  367.2  161.6  22.92
2.6  Line 5605 and line 6740 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  373.8  157.2  23.55
2.6  Line 5606 and line 6741 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  374.3  156.9  23.57
2.6  Line 5608 and line 6743 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  375.2  156.3  23.6
2.6  Line 5611 and line 6746 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  376.5  155.4  23.67
2.6  Line 5614 and line 6749 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  377.8  154.5  23.96
2.6  Line 5619 and line 6754 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  379.7  152.8  24.37
2.6  Line 5620 and line 6755 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  380.2  152.5  24.28
2.6  Line 5621 and line 6756 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  380.6  152.2  24.19
2.6  Line 5622 and line 6757 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  381.1  152.0  24.14
2.6  Line 5624 and line 6759 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  382.0  151.4  24.17
2.6  Line 5625 and line 6760 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  382.4  151.09  24.25
2.6  Line 5627 and line 6762 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  383.3  150.5  24.33
2.6  Line 5628 and line 6763 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  383.8  150.3  24.37
2.6  Line 5629 and line 6764 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  384.3  150.09  24.41
2.6  Line 5631 and line 6766 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  385.2  149.5  24.51
2.6  Line 5632 and line 6767 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  385.6  149.09  24.57
2.6  Line 2761 and line 2936 have the same coordinates.  (second line removed)
     A      X, Y, Z:  279.0  220.4  18.3
2.1  Line 3010 has 4 daughters.  Type is 4.  (no action taken)
     B1      X, Y, Z:  320.8  200.4  14.75
 
 


Number of type A irregularities = 16
Number of type B1 irregularities = 59
Number of type B2 irregularities = 0
Number of type C irregularities = 0
