# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-5_z00_ch00.ims.swc.swc created with StdSwc version 1.31 on 4/16/18.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-5_z00_ch00.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 4.  (no action taken)
     B1      X, Y, Z:  246.5  303.19  20.03
2.4  Seg length ending at pt. 4091 >= 6.0 stdevs above mean at 1.2062.  (no action taken)
     B1      X, Y, Z:  330.2  241.5  25.96
2.4  Seg length ending at pt. 4093 >= 6.0 stdevs above mean at 1.1409.  (no action taken)
     B1      X, Y, Z:  332.3  242.2  25.94
2.4  Seg length ending at pt. 4094 >= 6.0 stdevs above mean at 1.1049.  (no action taken)
     B1      X, Y, Z:  333.4  242.3  25.91
2.4  Seg length ending at pt. 4095 >= 6.0 stdevs above mean at 1.1029.  (no action taken)
     B1      X, Y, Z:  334.5  242.3  25.83
2.4  Seg length ending at pt. 4096 >= 6.0 stdevs above mean at 1.1074.  (no action taken)
     B1      X, Y, Z:  335.6  242.4  25.75
2.4  Seg length ending at pt. 4256 >= 6.0 stdevs above mean at 1.4116.  (no action taken)
     B1      X, Y, Z:  338.2  243.0  25.42
2.4  Seg length ending at pt. 4543 >= 6.0 stdevs above mean at 1.4114.  (no action taken)
     B1      X, Y, Z:  368.8  243.3  24.15
2.4  Seg length ending at pt. 4900 >= 6.0 stdevs above mean at 1.257.  (no action taken)
     B1      X, Y, Z:  347.9  247.7  24.75
2.4  Seg length ending at pt. 4981 >= 6.0 stdevs above mean at 1.2083.  (no action taken)
     B1      X, Y, Z:  365.9  282.6  16.35
2.4  Seg length ending at pt. 5091 >= 6.0 stdevs above mean at 1.1576.  (no action taken)
     B1      X, Y, Z:  339.9  244.3  26.3
2.4  Seg length ending at pt. 5302 >= 6.0 stdevs above mean at 1.1217.  (no action taken)
     B1      X, Y, Z:  416.5  247.4  28.41
2.4  Seg length ending at pt. 5455 >= 6.0 stdevs above mean at 1.1338.  (no action taken)
     B1      X, Y, Z:  365.6  251.0  28.28
2.4  Seg length ending at pt. 5473 >= 6.0 stdevs above mean at 1.1788.  (no action taken)
     B1      X, Y, Z:  329.0  239.5  25.75
2.5  Seg length ending at pt. 5474 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  329.03  239.52  25.75
2.4  Seg length ending at pt. 5476 >= 6.0 stdevs above mean at 1.1058.  (no action taken)
     B1      X, Y, Z:  329.9  238.9  25.98
2.4  Seg length ending at pt. 5485 >= 6.0 stdevs above mean at 1.0849.  (no action taken)
     B1      X, Y, Z:  330.1  230.2  25.62
2.4  Seg length ending at pt. 5961 >= 6.0 stdevs above mean at 1.2698.  (no action taken)
     B1      X, Y, Z:  329.8  174.8  23.71
2.4  Seg length ending at pt. 6047 >= 6.0 stdevs above mean at 1.3103.  (no action taken)
     B1      X, Y, Z:  333.4  212.6  26.9
2.4  Seg length ending at pt. 6718 >= 6.0 stdevs above mean at 1.3601.  (no action taken)
     B1      X, Y, Z:  398.3  107.8  19.65
2.4  Seg length ending at pt. 6953 >= 6.0 stdevs above mean at 1.3176.  (no action taken)
     B1      X, Y, Z:  318.6  187.7  18.94
2.4  Seg length ending at pt. 7025 >= 6.0 stdevs above mean at 1.3237.  (no action taken)
     B1      X, Y, Z:  333.7  215.5  23.71
2.4  Seg length ending at pt. 7195 >= 6.0 stdevs above mean at 1.4255.  (no action taken)
     B1      X, Y, Z:  332.0  224.2  25.69
2.4  Seg length ending at pt. 8022 >= 6.0 stdevs above mean at 1.1107.  (no action taken)
     B1      X, Y, Z:  328.8  238.5  26.19
2.4  Seg length ending at pt. 8023 >= 6.0 stdevs above mean at 1.1898.  (no action taken)
     B1      X, Y, Z:  329.1  237.4  26.53
2.4  Seg length ending at pt. 8024 >= 6.0 stdevs above mean at 1.1102.  (no action taken)
     B1      X, Y, Z:  329.7  236.5  26.78
2.4  Seg length ending at pt. 8025 >= 6.0 stdevs above mean at 1.1507.  (no action taken)
     B1      X, Y, Z:  330.5  235.7  26.99
2.4  Seg length ending at pt. 8026 >= 6.0 stdevs above mean at 1.0894.  (no action taken)
     B1      X, Y, Z:  331.4  235.1  27.12
2.4  Seg length ending at pt. 8029 >= 6.0 stdevs above mean at 1.1479.  (no action taken)
     B1      X, Y, Z:  334.5  234.2  26.75
2.4  Seg length ending at pt. 8030 >= 6.0 stdevs above mean at 1.0817.  (no action taken)
     B1      X, Y, Z:  335.5  233.8  26.65
2.4  Seg length ending at pt. 8129 >= 6.0 stdevs above mean at 1.1184.  (no action taken)
     B1      X, Y, Z:  380.4  208.6  26.78
2.4  Seg length ending at pt. 8174 >= 6.0 stdevs above mean at 1.2427.  (no action taken)
     B1      X, Y, Z:  355.5  218.0  27.12
2.4  Seg length ending at pt. 8338 >= 6.0 stdevs above mean at 1.4134.  (no action taken)
     B1      X, Y, Z:  431.4  198.4  13.99
2.4  Seg length ending at pt. 8538 >= 6.0 stdevs above mean at 1.301.  (no action taken)
     B1      X, Y, Z:  356.6  202.1  21.8
2.4  Seg length ending at pt. 8577 >= 6.0 stdevs above mean at 1.2059.  (no action taken)
     B1      X, Y, Z:  354.9  209.0  26.57
2.4  Seg length ending at pt. 8660 >= 6.0 stdevs above mean at 1.4543.  (no action taken)
     B1      X, Y, Z:  389.1  185.0  23.71
2.5  Seg length ending at pt. 8715 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  329.0  239.5  25.75
2.4  Seg length ending at pt. 8716 >= 6.0 stdevs above mean at 1.2202.  (no action taken)
     B1      X, Y, Z:  328.8  238.5  26.42
2.4  Seg length ending at pt. 8717 >= 6.0 stdevs above mean at 1.0991.  (no action taken)
     B1      X, Y, Z:  329.0  237.5  26.83
2.4  Seg length ending at pt. 8718 >= 6.0 stdevs above mean at 1.1712.  (no action taken)
     B1      X, Y, Z:  329.4  236.4  26.87
2.4  Seg length ending at pt. 8719 >= 6.0 stdevs above mean at 1.1234.  (no action taken)
     B1      X, Y, Z:  329.9  235.4  26.76
2.4  Seg length ending at pt. 8720 >= 6.0 stdevs above mean at 1.1324.  (no action taken)
     B1      X, Y, Z:  330.4  234.4  26.58
2.4  Seg length ending at pt. 8722 >= 6.0 stdevs above mean at 1.1019.  (no action taken)
     B1      X, Y, Z:  331.7  232.8  26.08
2.4  Seg length ending at pt. 8724 >= 6.0 stdevs above mean at 1.1873.  (no action taken)
     B1      X, Y, Z:  333.3  231.6  26.39
2.4  Seg length ending at pt. 8744 >= 6.0 stdevs above mean at 1.4908.  (no action taken)
     B1      X, Y, Z:  341.4  226.6  27.9
2.4  Seg length ending at pt. 8796 >= 6.0 stdevs above mean at 1.0993.  (no action taken)
     B1      X, Y, Z:  365.6  239.2  27.03
2.4  Seg length ending at pt. 8970 >= 6.0 stdevs above mean at 1.2093.  (no action taken)
     B1      X, Y, Z:  428.8  233.4  28.23
2.4  Seg length ending at pt. 9039 >= 6.0 stdevs above mean at 1.6348.  (no action taken)
     B1      X, Y, Z:  394.9  239.4  25.78
2.4  Seg length ending at pt. 9217 >= 6.0 stdevs above mean at 1.3162.  (no action taken)
     B1      X, Y, Z:  374.3  242.0  26.67
2.4  Seg length ending at pt. 9235 >= 6.0 stdevs above mean at 1.2663.  (no action taken)
     B1      X, Y, Z:  383.1  247.1  26.31
2.5  Seg length ending at pt. 5475 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  329.0  239.5  25.75
2.4  Seg length ending at pt. 2190 >= 6.0 stdevs above mean at 1.5033.  (no action taken)
     B1      X, Y, Z:  118.2  408.8  21.37
2.4  Seg length ending at pt. 2512 >= 6.0 stdevs above mean at 1.4555.  (no action taken)
     B1      X, Y, Z:  237.6  306.19  24.75
2.4  Seg length ending at pt. 3665 >= 6.0 stdevs above mean at 1.578.  (no action taken)
     B1      X, Y, Z:  304.9  263.3  23.87
2.4  Seg length ending at pt. 4090 >= 6.0 stdevs above mean at 8.7943.  (no action taken)
     B1      X, Y, Z:  329.4  240.6  25.89
1.2  Line 4091 of type 3 links to incorrect type 4.  (no action taken)
     B1      X, Y, Z:  330.2  241.5  25.96
1.2  Line 5473 of type 3 links to incorrect type 4.  (no action taken)
     B1      X, Y, Z:  329.0  239.5  25.75
2.1  Line 5473 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  329.0  239.5  25.75
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 55
Number of type B2 irregularities = 0
Number of type C irregularities = 0
