# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-3_z00_ch00.ims.swc.swc created with StdSwc version 1.31 on 4/16/18.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-3_z00_ch00.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  284.1  209.8  20.25
2.5  Seg length ending at pt. 2 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  284.1  209.8  20.25
2.4  Seg length ending at pt. 378 >= 6.0 stdevs above mean at 1.1969.  (no action taken)
     B1      X, Y, Z:  269.3  181.7  21.82
2.4  Seg length ending at pt. 395 >= 6.0 stdevs above mean at 1.1832.  (no action taken)
     B1      X, Y, Z:  271.6  172.2  22.05
2.4  Seg length ending at pt. 711 >= 6.0 stdevs above mean at 1.3194.  (no action taken)
     B1      X, Y, Z:  352.4  122.9  11.22
2.4  Seg length ending at pt. 719 >= 6.0 stdevs above mean at 1.3312.  (no action taken)
     B1      X, Y, Z:  326.0  155.6  18.35
2.5  Seg length ending at pt. 847 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  284.01  217.61  21.75
2.4  Seg length ending at pt. 862 >= 6.0 stdevs above mean at 1.2093.  (no action taken)
     B1      X, Y, Z:  277.19  230.3  22.75
2.4  Seg length ending at pt. 1200 >= 6.0 stdevs above mean at 1.2857.  (no action taken)
     B1      X, Y, Z:  279.19  224.3  22.75
2.5  Seg length ending at pt. 4591 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  284.0  217.6  21.75
2.4  Seg length ending at pt. 4602 >= 6.0 stdevs above mean at 1.3081.  (no action taken)
     B1      X, Y, Z:  282.19  227.5  24.08
2.5  Seg length ending at pt. 4717 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  284.0  217.6  21.75
2.4  Seg length ending at pt. 5166 >= 6.0 stdevs above mean at 1.2812.  (no action taken)
     B1      X, Y, Z:  304.8  160.3  25.53
2.4  Seg length ending at pt. 5193 >= 6.0 stdevs above mean at 1.2369.  (no action taken)
     B1      X, Y, Z:  313.4  147.9  25.4
2.4  Seg length ending at pt. 5479 >= 6.0 stdevs above mean at 1.209.  (no action taken)
     B1      X, Y, Z:  324.7  146.8  25.58
2.4  Seg length ending at pt. 5994 >= 6.0 stdevs above mean at 1.3568.  (no action taken)
     B1      X, Y, Z:  334.7  214.0  23.8
2.4  Seg length ending at pt. 6414 >= 6.0 stdevs above mean at 1.4425.  (no action taken)
     B1      X, Y, Z:  379.3  175.1  23.65
2.4  Seg length ending at pt. 1196 >= 6.0 stdevs above mean at 1.8682.  (no action taken)
     B1      X, Y, Z:  277.1  226.7  22.53
2.4  Seg length ending at pt. 1456 >= 6.0 stdevs above mean at 1.467.  (no action taken)
     B1      X, Y, Z:  233.0  265.9  25.71
2.4  Seg length ending at pt. 1691 >= 6.0 stdevs above mean at 1.1055.  (no action taken)
     B1      X, Y, Z:  220.0  296.69  26.07
2.4  Seg length ending at pt. 1704 >= 6.0 stdevs above mean at 1.2176.  (no action taken)
     B1      X, Y, Z:  226.6  300.19  24.6
2.4  Seg length ending at pt. 1793 >= 6.0 stdevs above mean at 1.2728.  (no action taken)
     B1      X, Y, Z:  215.7  292.4  26.08
2.4  Seg length ending at pt. 1928 >= 6.0 stdevs above mean at 1.0002.  (no action taken)
     B1      X, Y, Z:  219.5  279.4  25.6
2.4  Seg length ending at pt. 2173 >= 6.0 stdevs above mean at 1.0124.  (no action taken)
     B1      X, Y, Z:  142.0  378.7  23.62
2.4  Seg length ending at pt. 2508 >= 6.0 stdevs above mean at 1.0833.  (no action taken)
     B1      X, Y, Z:  142.9  452.5  19.71
2.4  Seg length ending at pt. 2713 >= 6.0 stdevs above mean at 1.2659.  (no action taken)
     B1      X, Y, Z:  158.8  547.1  26.6
2.4  Seg length ending at pt. 2742 >= 6.0 stdevs above mean at 1.2241.  (no action taken)
     B1      X, Y, Z:  159.8  539.5  26.28
2.4  Seg length ending at pt. 2758 >= 6.0 stdevs above mean at 1.1559.  (no action taken)
     B1      X, Y, Z:  167.3  544.2  25.94
2.4  Seg length ending at pt. 2789 >= 6.0 stdevs above mean at 1.0002.  (no action taken)
     B1      X, Y, Z:  154.0  521.0  25.78
2.4  Seg length ending at pt. 2810 >= 6.0 stdevs above mean at 1.0257.  (no action taken)
     B1      X, Y, Z:  144.7  526.7  26.48
2.4  Seg length ending at pt. 2937 >= 6.0 stdevs above mean at 1.2117.  (no action taken)
     B1      X, Y, Z:  141.4  366.5  24.66
2.4  Seg length ending at pt. 3074 >= 6.0 stdevs above mean at 1.2947.  (no action taken)
     B1      X, Y, Z:  151.59  341.5  24.78
2.4  Seg length ending at pt. 3128 >= 6.0 stdevs above mean at 1.2042.  (no action taken)
     B1      X, Y, Z:  158.6  329.2  25.58
2.4  Seg length ending at pt. 3378 >= 6.0 stdevs above mean at 1.0753.  (no action taken)
     B1      X, Y, Z:  97.49  371.0  27.64
2.4  Seg length ending at pt. 3575 >= 6.0 stdevs above mean at 1.3728.  (no action taken)
     B1      X, Y, Z:  57.78  461.0  19.3
2.4  Seg length ending at pt. 3779 >= 6.0 stdevs above mean at 1.1386.  (no action taken)
     B1      X, Y, Z:  40.03  469.8  20.83
2.4  Seg length ending at pt. 3857 >= 6.0 stdevs above mean at 1.4272.  (no action taken)
     B1      X, Y, Z:  56.95  462.0  18.71
2.4  Seg length ending at pt. 4037 >= 6.0 stdevs above mean at 1.2426.  (no action taken)
     B1      X, Y, Z:  57.78  459.6  18.08
2.4  Seg length ending at pt. 4150 >= 6.0 stdevs above mean at 1.4151.  (no action taken)
     B1      X, Y, Z:  180.1  309.9  25.03
2.4  Seg length ending at pt. 4382 >= 6.0 stdevs above mean at 1.3006.  (no action taken)
     B1      X, Y, Z:  192.5  298.19  25.62
2.4  Seg length ending at pt. 4459 >= 6.0 stdevs above mean at 1.0383.  (no action taken)
     B1      X, Y, Z:  206.7  287.19  25.58
2.4  Seg length ending at pt. 4495 >= 6.0 stdevs above mean at 1.0765.  (no action taken)
     B1      X, Y, Z:  189.2  291.8  23.08
1.2  Line 1196 of type 4 links to incorrect type 3      (type changed to 3)
     A       X, Y, Z:  277.1  226.7  22.53
1.2  Line 1201 of type 4 links to incorrect type 3.  (no action taken)
     B1      X, Y, Z:  276.69  227.1  22.53
2.1  Line 846 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  284.02  217.62  21.75
 
 


Number of type A irregularities = 5
Number of type B1 irregularities = 40
Number of type B2 irregularities = 0
Number of type C irregularities = 0
