# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-2_z00_ch00_3.ims.swc.swc created with StdSwc version 1.31 on 4/16/18.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-2_z00_ch00_3.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 4.  (no action taken)
     B1      X, Y, Z:  177.4  294.4  16.75
2.4  Seg length ending at pt. 289 >= 6.0 stdevs above mean at 1.1245.  (no action taken)
     B1      X, Y, Z:  325.6  211.4  17.75
2.5  Seg length ending at pt. 290 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  325.63  211.42  17.75
2.4  Seg length ending at pt. 291 >= 6.0 stdevs above mean at 1.1673.  (no action taken)
     B1      X, Y, Z:  326.5  210.9  18.3
2.4  Seg length ending at pt. 293 >= 6.0 stdevs above mean at 1.1154.  (no action taken)
     B1      X, Y, Z:  327.5  209.2  19.0
2.4  Seg length ending at pt. 313 >= 6.0 stdevs above mean at 1.1664.  (no action taken)
     B1      X, Y, Z:  330.5  195.4  18.14
2.4  Seg length ending at pt. 382 >= 6.0 stdevs above mean at 1.3793.  (no action taken)
     B1      X, Y, Z:  322.3  159.7  16.92
2.5  Seg length ending at pt. 1472 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  325.6  211.4  17.75
2.4  Seg length ending at pt. 1535 >= 6.0 stdevs above mean at 1.2207.  (no action taken)
     B1      X, Y, Z:  332.6  175.4  20.05
2.4  Seg length ending at pt. 1830 >= 6.0 stdevs above mean at 1.3673.  (no action taken)
     B1      X, Y, Z:  372.4  153.9  21.19
2.4  Seg length ending at pt. 2321 >= 6.0 stdevs above mean at 1.2405.  (no action taken)
     B1      X, Y, Z:  333.6  209.2  15.08
2.4  Seg length ending at pt. 2588 >= 6.0 stdevs above mean at 1.1437.  (no action taken)
     B1      X, Y, Z:  374.5  197.3  17.51
2.4  Seg length ending at pt. 2826 >= 6.0 stdevs above mean at 1.2919.  (no action taken)
     B1      X, Y, Z:  379.3  187.6  18.42
2.4  Seg length ending at pt. 3049 >= 6.0 stdevs above mean at 1.143.  (no action taken)
     B1      X, Y, Z:  383.4  183.5  14.91
2.4  Seg length ending at pt. 3234 >= 6.0 stdevs above mean at 1.2722.  (no action taken)
     B1      X, Y, Z:  460.0  173.4  9.53
2.4  Seg length ending at pt. 3584 >= 6.0 stdevs above mean at 1.2703.  (no action taken)
     B1      X, Y, Z:  415.1  199.7  15.81
2.4  Seg length ending at pt. 3761 >= 6.0 stdevs above mean at 3.9839.  (no action taken)
     B1      X, Y, Z:  326.4  213.5  17.94
2.4  Seg length ending at pt. 3762 >= 6.0 stdevs above mean at 1.1402.  (no action taken)
     B1      X, Y, Z:  327.3  214.2  17.94
2.4  Seg length ending at pt. 3763 >= 6.0 stdevs above mean at 1.1187.  (no action taken)
     B1      X, Y, Z:  328.3  214.7  17.9
2.4  Seg length ending at pt. 3765 >= 6.0 stdevs above mean at 1.1476.  (no action taken)
     B1      X, Y, Z:  330.4  215.3  17.69
2.4  Seg length ending at pt. 3767 >= 6.0 stdevs above mean at 1.1602.  (no action taken)
     B1      X, Y, Z:  332.5  215.1  17.17
2.4  Seg length ending at pt. 3790 >= 6.0 stdevs above mean at 1.1543.  (no action taken)
     B1      X, Y, Z:  345.8  217.6  17.39
2.4  Seg length ending at pt. 4118 >= 6.0 stdevs above mean at 1.2632.  (no action taken)
     B1      X, Y, Z:  390.0  223.9  20.08
2.4  Seg length ending at pt. 4171 >= 6.0 stdevs above mean at 1.3455.  (no action taken)
     B1      X, Y, Z:  417.1  231.8  20.03
2.4  Seg length ending at pt. 4693 >= 6.0 stdevs above mean at 1.2573.  (no action taken)
     B1      X, Y, Z:  371.7  213.0  24.26
2.4  Seg length ending at pt. 287 >= 6.0 stdevs above mean at 6.0304.  (no action taken)
     B1      X, Y, Z:  322.44  213.93  18.01
2.4  Seg length ending at pt. 288 >= 6.0 stdevs above mean at 3.6543.  (no action taken)
     B1      X, Y, Z:  325.8  212.5  17.87
2.4  Seg length ending at pt. 5514 >= 6.0 stdevs above mean at 2.7026.  (no action taken)
     B1      X, Y, Z:  229.6  294.69  18.78
2.4  Seg length ending at pt. 6287 >= 6.0 stdevs above mean at 2.5934.  (no action taken)
     B1      X, Y, Z:  208.7  312.9  17.78
2.4  Seg length ending at pt. 6306 >= 6.0 stdevs above mean at 2.5259.  (no action taken)
     B1      X, Y, Z:  188.3  312.4  17.26
2.4  Seg length ending at pt. 6333 >= 6.0 stdevs above mean at 2.5151.  (no action taken)
     B1      X, Y, Z:  201.5  319.6  16.64
2.4  Seg length ending at pt. 6550 >= 6.0 stdevs above mean at 2.507.  (no action taken)
     B1      X, Y, Z:  167.6  351.0  15.82
1.2  Line 289 of type 3 links to incorrect type 4.  (no action taken)
     B1      X, Y, Z:  325.6  211.4  17.75
1.2  Line 3761 of type 3 links to incorrect type 4.  (no action taken)
     B1      X, Y, Z:  326.4  213.5  17.94
2.7  Line 6235 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  161.0  513.3  14.25
2.1  Line 289 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  325.6  211.4  17.75
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 33
Number of type B2 irregularities = 0
Number of type C irregularities = 0
