# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-1_z00_ch00_3.ims.swc.swc created with StdSwc version 1.31 on 4/16/18.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-1_z00_ch00_3.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  339.0  217.6  8.25
2.5  Seg length ending at pt. 9 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  339.0  217.6  8.25
2.4  Seg length ending at pt. 1337 >= 6.0 stdevs above mean at 2.492.  (no action taken)
     B1      X, Y, Z:  337.0  196.3  16.78
2.4  Seg length ending at pt. 1352 >= 6.0 stdevs above mean at 2.5362.  (no action taken)
     B1      X, Y, Z:  342.4  180.9  17.85
2.4  Seg length ending at pt. 1374 >= 6.0 stdevs above mean at 2.3297.  (no action taken)
     B1      X, Y, Z:  352.0  158.7  17.99
2.4  Seg length ending at pt. 1728 >= 6.0 stdevs above mean at 2.8659.  (no action taken)
     B1      X, Y, Z:  280.6  119.2  15.29
2.5  Seg length ending at pt. 2697 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  334.13  223.92  18.25
2.4  Seg length ending at pt. 2886 >= 6.0 stdevs above mean at 2.7115.  (no action taken)
     B1      X, Y, Z:  437.9  210.5  9.76
2.5  Seg length ending at pt. 3204 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  334.1  223.9  18.25
2.5  Seg length ending at pt. 2698 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  334.1  223.9  18.25
2.4  Seg length ending at pt. 3297 >= 6.0 stdevs above mean at 11.7455.  (no action taken)
     B1      X, Y, Z:  326.6  232.8  20.25
1.2  Line 3296 of type 4 links to incorrect type 3.  (no action taken)
     B1      X, Y, Z:  334.5  224.5  17.67
1.2  Line 6206 of type 3 links to incorrect type 4.  (no action taken)
     B1      X, Y, Z:  335.0  225.2  17.16
2.7  Line 938 of rad 1.338 is an included side branch.  (removed)
     A      X, Y, Z:  417.6  133.7  19.75
2.7  Line 1597 of rad 1.338 is an included side branch.  (removed)
     A      X, Y, Z:  341.2  182.0  17.75
2.7  Line 2923 of rad 1.338 is an included side branch.  (removed)
     A      X, Y, Z:  435.8  211.3  9.25
2.7  Line 6205 of rad 0.914 is an included side branch.  (removed)
     A      X, Y, Z:  156.6  493.4  18.75
2.6  Line 2671 and line 2696 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  334.1  223.9  18.25
2.6  Line 3490 and line 3652 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  261.1  280.0  20.51
2.1  Line 2696 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  334.1  223.9  18.25
 
 


Number of type A irregularities = 8
Number of type B1 irregularities = 12
Number of type B2 irregularities = 0
Number of type C irregularities = 0
