# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-1_z00_ch00_2.ims.swc.swc created with StdSwc version 1.31 on 4/16/18.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-1_z00_ch00_2.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  342.5  237.8  16.25
4.5  Radius of terminal line 164 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  415.3  220.8  15.25
4.5  Radius of terminal line 472 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  481.7  172.0  17.75
4.5  Radius of terminal line 645 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  476.1  209.8  18.25
4.5  Radius of terminal line 909 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  479.1  161.1  14.75
4.5  Radius of terminal line 1021 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  409.1  197.0  21.75
4.5  Radius of terminal line 1087 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  415.9  172.2  24.25
4.5  Radius of terminal line 1332 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  390.6  99.73  26.75
4.5  Radius of terminal line 1503 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  366.5  93.15  24.75
4.5  Radius of terminal line 1631 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  340.0  103.1  25.75
4.5  Radius of terminal line 1707 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  357.4  171.3  10.25
4.5  Radius of terminal line 1713 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  365.0  168.5  13.41
4.5  Radius of terminal line 1883 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  401.2  106.9  16.75
4.5  Radius of terminal line 1938 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  361.0  132.0  13.75
4.5  Radius of terminal line 2006 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  331.9  128.59  16.25
4.5  Radius of terminal line 4768 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  409.9  299.69  22.75
4.5  Radius of terminal line 5043 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  483.1  184.9  19.75
4.5  Radius of terminal line 5168 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  460.2  257.6  20.25
4.5  Radius of terminal line 5300 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  463.4  201.9  24.75
4.5  Radius of terminal line 5502 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  457.3  269.0  18.25
4.5  Radius of terminal line 5709 at 0.914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  442.6  196.6  19.87
2.4  Seg length ending at pt. 3 >= 6.0 stdevs above mean at 1.0819.  (no action taken)
     B1      X, Y, Z:  340.9  236.5  16.23
2.4  Seg length ending at pt. 4 >= 6.0 stdevs above mean at 1.0778.  (no action taken)
     B1      X, Y, Z:  339.9  236.1  16.19
2.4  Seg length ending at pt. 7 >= 6.0 stdevs above mean at 1.1022.  (no action taken)
     B1      X, Y, Z:  336.8  235.7  16.01
2.4  Seg length ending at pt. 8 >= 6.0 stdevs above mean at 1.1062.  (no action taken)
     B1      X, Y, Z:  335.7  235.8  15.95
2.4  Seg length ending at pt. 10 >= 6.0 stdevs above mean at 1.1455.  (no action taken)
     B1      X, Y, Z:  333.9  236.9  15.75
2.4  Seg length ending at pt. 166 >= 6.0 stdevs above mean at 1.2087.  (no action taken)
     B1      X, Y, Z:  335.0  237.4  15.78
2.4  Seg length ending at pt. 167 >= 6.0 stdevs above mean at 1.1182.  (no action taken)
     B1      X, Y, Z:  336.1  237.6  15.8
2.4  Seg length ending at pt. 168 >= 6.0 stdevs above mean at 1.1402.  (no action taken)
     B1      X, Y, Z:  337.2  237.3  15.81
2.4  Seg length ending at pt. 169 >= 6.0 stdevs above mean at 1.077.  (no action taken)
     B1      X, Y, Z:  338.2  236.9  15.81
2.4  Seg length ending at pt. 170 >= 6.0 stdevs above mean at 1.0817.  (no action taken)
     B1      X, Y, Z:  339.1  236.3  15.8
2.4  Seg length ending at pt. 172 >= 6.0 stdevs above mean at 1.1315.  (no action taken)
     B1      X, Y, Z:  340.8  235.0  15.74
2.4  Seg length ending at pt. 173 >= 6.0 stdevs above mean at 1.1406.  (no action taken)
     B1      X, Y, Z:  341.5  234.1  15.71
2.4  Seg length ending at pt. 174 >= 6.0 stdevs above mean at 1.077.  (no action taken)
     B1      X, Y, Z:  341.9  233.1  15.71
2.4  Seg length ending at pt. 175 >= 6.0 stdevs above mean at 1.2007.  (no action taken)
     B1      X, Y, Z:  341.9  231.9  15.75
2.4  Seg length ending at pt. 176 >= 6.0 stdevs above mean at 1.2324.  (no action taken)
     B1      X, Y, Z:  342.9  231.2  15.92
2.4  Seg length ending at pt. 270 >= 6.0 stdevs above mean at 1.3946.  (no action taken)
     B1      X, Y, Z:  388.4  217.1  17.74
2.4  Seg length ending at pt. 663 >= 6.0 stdevs above mean at 1.1487.  (no action taken)
     B1      X, Y, Z:  365.8  212.9  17.39
2.4  Seg length ending at pt. 1007 >= 6.0 stdevs above mean at 1.1414.  (no action taken)
     B1      X, Y, Z:  401.7  197.8  21.1
2.4  Seg length ending at pt. 1679 >= 6.0 stdevs above mean at 1.0949.  (no action taken)
     B1      X, Y, Z:  364.6  177.5  15.92
2.4  Seg length ending at pt. 1695 >= 6.0 stdevs above mean at 1.0809.  (no action taken)
     B1      X, Y, Z:  362.4  170.8  13.13
2.4  Seg length ending at pt. 1894 >= 6.0 stdevs above mean at 1.18.  (no action taken)
     B1      X, Y, Z:  352.8  153.09  15.49
2.4  Seg length ending at pt. 1906 >= 6.0 stdevs above mean at 1.358.  (no action taken)
     B1      X, Y, Z:  354.9  146.59  14.29
2.5  Seg length ending at pt. 4579 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  342.5  237.8  16.25
2.4  Seg length ending at pt. 4580 >= 6.0 stdevs above mean at 1.1309.  (no action taken)
     B1      X, Y, Z:  343.6  238.0  16.42
2.4  Seg length ending at pt. 4596 >= 6.0 stdevs above mean at 1.1031.  (no action taken)
     B1      X, Y, Z:  352.6  239.7  17.12
2.4  Seg length ending at pt. 4781 >= 6.0 stdevs above mean at 1.3032.  (no action taken)
     B1      X, Y, Z:  358.8  241.1  17.6
2.4  Seg length ending at pt. 5365 >= 6.0 stdevs above mean at 1.0677.  (no action taken)
     B1      X, Y, Z:  389.2  253.7  18.35
2.4  Seg length ending at pt. 5437 >= 6.0 stdevs above mean at 1.1808.  (no action taken)
     B1      X, Y, Z:  426.6  260.4  18.87
2.4  Seg length ending at pt. 5647 >= 6.0 stdevs above mean at 1.1731.  (no action taken)
     B1      X, Y, Z:  434.9  225.9  16.98
2.4  Seg length ending at pt. 2007 >= 6.0 stdevs above mean at 9.7329.  (no action taken)
     B1      X, Y, Z:  326.1  242.7  15.25
1.2  Line 165 of type 4 links to incorrect type 3      (type changed to 3)
     A       X, Y, Z:  333.9  236.9  15.75
1.2  Line 2007 of type 4 links to incorrect type 3.  (no action taken)
     B1      X, Y, Z:  326.1  242.7  15.25
2.6  Line 10 and line 165 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  333.9  236.9  15.75
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 52
Number of type B2 irregularities = 0
Number of type C irregularities = 0
