# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-11_z00_ch00.ims.swc.swc created with StdSwc version 1.31 on 4/16/18.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\CA1-dendrites-20X-11_z00_ch00.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 4.  (no action taken)
     B1      X, Y, Z:  162.1  300.1  19.53
2.4  Seg length ending at pt. 1186 >= 6.0 stdevs above mean at 4.4871.  (no action taken)
     B1      X, Y, Z:  345.2  203.0  18.91
2.4  Seg length ending at pt. 1264 >= 6.0 stdevs above mean at 1.826.  (no action taken)
     B1      X, Y, Z:  342.79  204.2  18.54
2.4  Seg length ending at pt. 1265 >= 6.0 stdevs above mean at 2.3503.  (no action taken)
     B1      X, Y, Z:  344.55  202.7  18.12
2.4  Seg length ending at pt. 1399 >= 6.0 stdevs above mean at 1.276.  (no action taken)
     B1      X, Y, Z:  401.4  206.9  10.84
2.4  Seg length ending at pt. 1649 >= 6.0 stdevs above mean at 1.3461.  (no action taken)
     B1      X, Y, Z:  397.3  201.6  16.85
2.4  Seg length ending at pt. 1779 >= 6.0 stdevs above mean at 1.3063.  (no action taken)
     B1      X, Y, Z:  411.4  203.0  16.58
2.4  Seg length ending at pt. 2567 >= 6.0 stdevs above mean at 1.3194.  (no action taken)
     B1      X, Y, Z:  351.4  196.8  16.28
2.4  Seg length ending at pt. 3301 >= 6.0 stdevs above mean at 1.8342.  (no action taken)
     B1      X, Y, Z:  344.3  203.2  18.25
2.4  Seg length ending at pt. 4268 >= 6.0 stdevs above mean at 1.5.  (no action taken)
     B1      X, Y, Z:  327.3  159.7  12.25
2.4  Seg length ending at pt. 4759 >= 6.0 stdevs above mean at 1.3917.  (no action taken)
     B1      X, Y, Z:  368.0  174.2  16.58
2.4  Seg length ending at pt. 899 >= 6.0 stdevs above mean at 2.6698.  (no action taken)
     B1      X, Y, Z:  245.4  296.19  21.25
2.4  Seg length ending at pt. 1185 >= 6.0 stdevs above mean at 8.7609.  (no action taken)
     B1      X, Y, Z:  341.29  205.2  18.83
1.2  Line 1186 of type 3 links to incorrect type 4.  (no action taken)
     B1      X, Y, Z:  345.2  203.0  18.91
1.2  Line 1264 of type 3 links to incorrect type 4.  (no action taken)
     B1      X, Y, Z:  342.79  204.2  18.54
2.7  Line 989 of rad 1.96 is an included side branch.  (removed)
     A      X, Y, Z:  251.6  294.6  19.33
2.6  Line 2556 and line 3301 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  344.3  203.2  18.25
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 16
Number of type B2 irregularities = 0
Number of type C irregularities = 0
