# Standardization file for C:\test3\Temp_LMeasure\10_CRMP2-33-GFP-M-cKO-CA1-4.ims.swc.swc created with StdSwc version 1.31 on 12/15/16.
# Edited SWC file saved as C:\test3\Temp_LMeasure\10_CRMP2-33-GFP-M-cKO-CA1-4.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  337.24  286.43  22.92
4.3  Radius of line 2387 at 4.532 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  337.09  284.26  21.84
2.5  Seg length ending at pt. 640 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  272.82  462.95  34.9
2.4  Seg length ending at pt. 862 >= 6.0 stdevs above mean at 4.7216.  (no action taken)
     B1      X, Y, Z:  287.25  479.09  41.57
2.4  Seg length ending at pt. 902 >= 6.0 stdevs above mean at 4.7091.  (no action taken)
     B1      X, Y, Z:  287.25  478.97  41.42
2.4  Seg length ending at pt. 930 >= 6.0 stdevs above mean at 4.5577.  (no action taken)
     B1      X, Y, Z:  287.25  479.03  41.5
2.4  Seg length ending at pt. 954 >= 6.0 stdevs above mean at 4.8827.  (no action taken)
     B1      X, Y, Z:  287.19  478.85  41.09
2.5  Seg length ending at pt. 1036 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  230.77  465.73  8.13
2.5  Seg length ending at pt. 1038 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  230.76  465.73  8.12
2.5  Seg length ending at pt. 1040 <= 0.1 at 0.0173.  (removed)
     A       X, Y, Z:  230.75  465.75  8.11
2.5  Seg length ending at pt. 1042 <= 0.1 at 0.0768.  (removed)
     A       X, Y, Z:  230.67  465.82  8.07
2.5  Seg length ending at pt. 1448 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  245.61  398.04  45.4
2.5  Seg length ending at pt. 1450 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  245.59  398.04  45.37
2.5  Seg length ending at pt. 1452 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  245.53  398.02  45.27
2.5  Seg length ending at pt. 2386 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  337.24  286.43  22.92
2.5  Seg length ending at pt. 3071 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  300.19  205.51  5.59
2.5  Seg length ending at pt. 3073 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  300.19  205.51  5.59
2.5  Seg length ending at pt. 3075 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  300.19  205.51  5.59
2.5  Seg length ending at pt. 3077 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  300.19  205.5  5.6
2.5  Seg length ending at pt. 3079 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  300.18  205.47  5.6
2.5  Seg length ending at pt. 3081 <= 0.1 at 0.0849.  (removed)
     A       X, Y, Z:  300.15  205.35  5.63
2.5  Seg length ending at pt. 3766 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  356.2  160.76  13.18
2.5  Seg length ending at pt. 3768 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  356.2  160.76  13.18
2.5  Seg length ending at pt. 3770 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  356.2  160.76  13.19
2.5  Seg length ending at pt. 3772 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  356.21  160.74  13.23
2.4  Seg length ending at pt. 4341 >= 6.0 stdevs above mean at 5.3193.  (no action taken)
     B1      X, Y, Z:  344.97  251.98  36.7
2.4  Seg length ending at pt. 4362 >= 6.0 stdevs above mean at 9.2322.  (no action taken)
     B1      X, Y, Z:  339.22  261.18  27.11
2.4  Seg length ending at pt. 4376 >= 6.0 stdevs above mean at 4.945.  (no action taken)
     B1      X, Y, Z:  337.76  263.16  25.48
2.5  Seg length ending at pt. 4530 <= 0.1 at 0.02.  (removed)
     A       X, Y, Z:  307.91  128.13  34.07
2.5  Seg length ending at pt. 4532 <= 0.1 at 0.04.  (removed)
     A       X, Y, Z:  307.91  128.07  34.08
2.5  Seg length ending at pt. 4553 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  303.47  107.46  32.97
2.5  Seg length ending at pt. 4555 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  303.47  107.46  32.97
2.5  Seg length ending at pt. 4557 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  303.47  107.46  32.97
2.5  Seg length ending at pt. 4559 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  303.47  107.46  32.97
2.5  Seg length ending at pt. 4561 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  303.47  107.45  32.97
2.5  Seg length ending at pt. 4563 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  303.48  107.43  32.95
2.5  Seg length ending at pt. 4565 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  303.54  107.36  32.88
2.5  Seg length ending at pt. 1037 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  230.77  465.73  8.13
2.5  Seg length ending at pt. 1041 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  230.72  465.77  8.1
2.5  Seg length ending at pt. 1449 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  245.6  398.04  45.39
2.5  Seg length ending at pt. 3072 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  300.19  205.51  5.59
2.5  Seg length ending at pt. 3076 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  300.19  205.51  5.6
2.5  Seg length ending at pt. 3080 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  300.17  205.43  5.61
2.5  Seg length ending at pt. 3767 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  356.2  160.76  13.18
2.5  Seg length ending at pt. 3771 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  356.21  160.75  13.21
2.5  Seg length ending at pt. 4531 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  307.91  128.11  34.08
2.5  Seg length ending at pt. 4554 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  303.47  107.46  32.97
2.5  Seg length ending at pt. 4558 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  303.47  107.46  32.97
2.5  Seg length ending at pt. 4562 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  303.47  107.45  32.96
2.5  Seg length ending at pt. 1039 <= 0.1 at 0.0173.  (removed)
     A       X, Y, Z:  230.76  465.74  8.12
2.5  Seg length ending at pt. 1451 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  245.57  398.03  45.34
2.5  Seg length ending at pt. 3074 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  300.19  205.51  5.59
2.5  Seg length ending at pt. 3769 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  356.2  160.76  13.19
2.5  Seg length ending at pt. 4556 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  303.47  107.46  32.97
2.5  Seg length ending at pt. 4564 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  303.5  107.41  32.93
2.5  Seg length ending at pt. 3078 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  300.19  205.49  5.6
2.5  Seg length ending at pt. 4560 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  303.47  107.45  32.97
2.7  Line 4361 of rad 2.11 is an included side branch.  (removed)
     A      X, Y, Z:  345.74  252.99  37.87
2.6  Line 1086 and line 1240 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  230.53  465.88  11.52
2.6  Line 1087 and line 1241 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  230.23  465.59  14.39
2.6  Line 1094 and line 1248 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  224.25  457.66  17.43
2.6  Line 1178 and line 1309 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  222.78  454.67  17.03
2.6  Line 3153 and line 3447 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  307.8  192.68  5.81
2.6  Line 3154 and line 3448 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  308.22  191.5  6.12
2.6  Line 3155 and line 3449 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  308.71  190.33  6.4
2.6  Line 3160 and line 3386 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  310.5  184.21  7.11
2.6  Line 3201 and line 3450 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  309.2  189.19  6.66
2.6  Line 3230 and line 3266 have the same coordinates.  (second line removed)
     A      X, Y, Z:  301.41  205.31  3.33
2.6  Line 3242 and line 3277 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  308.16  191.56  6.11
2.6  Line 3281 and line 3452 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  310.15  186.98  7.01
2.6  Line 3750 and line 3765 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  356.2  160.76  13.18
2.6  Line 3778 and line 3976 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  356.02  162.2  16.14
2.6  Line 3977 and line 4029 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  356.05  163.37  18.53
2.6  Line 4363 and line 4376 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  337.76  263.16  25.48
2.6  Line 4751 and line 4991 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  304.46  95.31  44.14
4.4  Line 52 of rad 2.032 links to 51 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  315.86  344.65  39.07
4.4  Line 1860 of rad 1.849 links to 51 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  315.68  345.32  41.96
4.4  Line 2387 of rad 4.532 links to 1 of rad 2.09.  (no action taken)
     B1      X, Y, Z:  337.09  284.26  21.84
4.4  Line 3266 of rad 1.25 links to 3070 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  302.49  204.56  1.97
4.4  Line 3647 of rad 1.353 links to 3636 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  298.14  192.42  39.81
4.4  Line 3751 of rad 1.666 links to 3750 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  356.14  161.13  13.93
4.4  Line 3778 of rad 1.666 links to 3776 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  356.02  162.2  16.14
4.4  Line 3817 of rad 1.666 links to 3775 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  356.03  162.19  16.11
4.4  Line 3851 of rad 1.666 links to 3774 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  356.11  162.44  16.53
4.4  Line 3883 of rad 1.666 links to 3773 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  355.98  162.23  16.19
4.4  Line 3919 of rad 1.666 links to 3765 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  356.11  162.43  16.46
4.4  Line 3948 of rad 1.666 links to 3765 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  355.98  162.23  16.2
4.4  Line 3976 of rad 1.666 links to 3765 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  356.02  162.2  16.14
4.4  Line 4003 of rad 1.666 links to 3765 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  356.11  162.43  16.48
4.4  Line 4028 of rad 1.666 links to 3765 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  356.02  162.2  16.13
4.4  Line 4051 of rad 1.666 links to 3765 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  355.93  162.19  16.03
4.4  Line 4076 of rad 1.666 links to 3765 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  355.94  162.22  16.13
4.4  Line 4095 of rad 1.666 links to 3765 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  356.01  162.21  16.39
4.4  Line 4118 of rad 1.666 links to 3750 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  355.93  162.13  16.2
4.4  Line 4376 of rad 1.911 links to 2857 of rad 0.703.  (no action taken)
     B1      X, Y, Z:  337.76  263.16  25.48
4.4  Line 5449 of rad 1.353 links to 5434 of rad 0.625.  (no action taken)
     B1      X, Y, Z:  343.39  282.39  14.27
2.1  Line 639 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  272.79  462.87  34.92
2.1  Line 1035 has 9 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  230.77  465.73  8.13
2.1  Line 1447 has 7 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  245.61  398.04  45.4
2.1  Line 3070 has 13 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  300.19  205.52  5.59
2.1  Line 3765 has 9 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  356.2  160.76  13.18
2.1  Line 4529 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  307.91  128.15  34.07
2.1  Line 4552 has 15 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  303.47  107.46  32.97
 
 


Number of type A irregularities = 50
Number of type B1 irregularities = 53
Number of type B2 irregularities = 0
Number of type C irregularities = 0
