# Standardization file for AM62-1-1.ASC.swc created with StdSwc version 1.31 by Duncan Donohue on 3/18/08.
# Edited SWC file saved as AM62-1-1.ASC.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     ordinates
#
4.3  Radius of line 7373 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -5.37  7.09  0.0
4.3  Radius of line 7374 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -6.34  10.76  0.0
4.3  Radius of line 7375 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -7.8  13.45  0.0
4.3  Radius of line 7376 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -8.78  16.63  0.5
4.3  Radius of line 7391 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -9.76  19.08  1.0
4.3  Radius of line 9831 at 0.49 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -39.43  109.29  -3.5
4.3  Radius of line 9832 at 0.49 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -39.67  110.75  -3.5
4.3  Radius of line 9894 at 0.49 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -39.43  113.45  -3.0
4.3  Radius of line 9895 at 0.49 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -39.91  116.38  -4.0
4.3  Radius of line 10097 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -41.38  122.98  -4.0
4.3  Radius of line 10098 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -42.6  124.94  -4.0
4.3  Radius of line 10189 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -43.33  126.41  -4.0
4.3  Radius of line 10190 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -46.62  133.75  -4.0
4.3  Radius of line 10191 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -48.57  139.13  -4.0
4.3  Radius of line 10192 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -49.79  141.09  -5.0
4.3  Radius of line 10193 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -50.77  144.51  -4.0
4.3  Radius of line 10194 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -52.23  148.67  -4.0
4.3  Radius of line 10195 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -52.72  150.14  -4.0
4.3  Radius of line 10196 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -54.43  152.34  -4.0
4.3  Radius of line 10197 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -55.64  154.54  -4.0
4.3  Radius of line 10198 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -56.62  159.43  -4.0
4.3  Radius of line 10199 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -58.08  162.85  -3.5
4.3  Radius of line 10200 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -58.82  166.03  -4.0
4.3  Radius of line 11323 at 0.73 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -30.99  102.31  -4.5
4.3  Radius of line 11324 at 0.73 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -27.57  102.55  -4.5
4.3  Radius of line 11325 at 0.73 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -25.87  102.8  -4.5
4.3  Radius of line 11326 at 0.49 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -23.67  101.57  -5.0
4.3  Radius of line 11327 at 0.49 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -21.96  101.57  -5.5
4.3  Radius of line 11328 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -20.01  102.06  -5.0
4.3  Radius of line 11329 at 0.365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -18.79  102.55  -3.5
4.3  Radius of line 2 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  0.98  -5.14  -2.5
4.3  Radius of line 3 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  0.73  -11.01  -3.0
4.3  Radius of line 4 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  0.98  -18.1  -3.5
4.3  Radius of line 5 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  1.46  -21.77  -2.0
4.3  Radius of line 6 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  3.66  -26.91  -3.0
4.3  Radius of line 7 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  4.15  -31.06  -2.5
4.3  Radius of line 8 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  4.15  -34.98  -2.5
4.3  Radius of line 9 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  5.12  -40.36  -2.5
4.3  Radius of line 10 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  6.1  -44.27  -2.5
4.3  Radius of line 11 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  6.83  -48.43  -2.5
4.3  Radius of line 12 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  8.05  -49.9  -3.0
4.3  Radius of line 13 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  9.51  -53.32  -4.0
4.3  Radius of line 14 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  10.85  -56.26  -4.0
4.3  Radius of line 15 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  12.32  -60.66  -3.5
4.3  Radius of line 16 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  13.78  -62.37  -3.5
4.3  Radius of line 17 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  15.98  -64.33  -3.5
4.3  Radius of line 18 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  18.17  -66.53  -4.0
4.3  Radius of line 19 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  19.88  -67.75  -4.0
4.3  Radius of line 20 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  21.58  -71.42  -4.0
4.3  Radius of line 21 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  21.83  -73.63  -4.5
4.3  Radius of line 22 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  21.58  -77.54  -4.0
4.3  Radius of line 23 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  21.1  -80.72  -5.0
4.3  Radius of line 24 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  20.61  -81.45  -6.5
4.3  Radius of line 25 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  20.61  -84.14  -5.5
4.3  Radius of line 26 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  19.63  -85.86  -6.0
4.5  Radius of terminal line 39 at 0.855 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  22.32  -79.99  -8.0
4.3  Radius of line 5155 at 1.1 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  45.24  -150.68  -6.5
4.3  Radius of line 7123 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -32.31  93.8  -3.0
4.3  Radius of line 7124 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -31.58  92.82  -2.5
4.3  Radius of line 7151 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -29.87  91.6  -4.0
4.3  Radius of line 7152 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -29.39  90.13  -4.0
4.3  Radius of line 7153 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -28.41  88.91  -3.5
4.3  Radius of line 7154 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -27.44  88.18  -3.5
4.3  Radius of line 7155 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -25.97  88.18  -4.0
4.3  Radius of line 7156 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -24.02  88.18  -4.5
4.3  Radius of line 7157 at 0.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  -23.29  87.69  -4.5
2.4  Seg length ending at pt. 9831 >= 6.0 stdevs above mean at 115.3671.  (no action taken)
     B1      X, Y, Z:  -39.43  109.29  -3.5
2.4  Seg length ending at pt. 11190 >= 6.0 stdevs above mean at 103.4405.  (no action taken)
     B1      X, Y, Z:  -44.77  94.23  -3.0
2.4  Seg length ending at pt. 11323 >= 6.0 stdevs above mean at 106.1586.  (no action taken)
     B1      X, Y, Z:  -30.99  102.31  -4.5
2.4  Seg length ending at pt. 11702 >= 6.0 stdevs above mean at 98.6267.  (no action taken)
     B1      X, Y, Z:  -42.08  90.08  -5.0
2.4  Seg length ending at pt. 4336 >= 6.0 stdevs above mean at 19.5671.  (no action taken)
     B1      X, Y, Z:  -164.38  392.34  27.5
2.4  Seg length ending at pt. 5160 >= 6.0 stdevs above mean at 97.6581.  (no action taken)
     B1      X, Y, Z:  -33.43  92.52  -5.5
2.4  Seg length ending at pt. 5671 >= 6.0 stdevs above mean at 19.0498.  (no action taken)
     B1      X, Y, Z:  0.11  219.47  30.0
2.4  Seg length ending at pt. 7123 >= 6.0 stdevs above mean at 98.3927.  (no action taken)
     B1      X, Y, Z:  -32.31  93.8  -3.0
2.4  Seg length ending at pt. 7297 >= 6.0 stdevs above mean at 98.0507.  (no action taken)
     B1      X, Y, Z:  -34.87  92.58  -0.5
2.4  Seg length ending at pt. 7346 >= 6.0 stdevs above mean at 100.4825.  (no action taken)
     B1      X, Y, Z:  -43.53  91.36  -6.5
2.6  Line 3423 and line 3427 have the same coordinates.  Parents do not match.  (Corrected using Neuromantic, see swc file header for details)
     B2      X, Y, Z:  345.84  392.34  63.0
4.4  Line 39 of rad 0.855 links to 38 of rad 0.12.  (no action taken)
     B1      X, Y, Z:  22.32  -79.99  -8.0
4.4  Line 5155 of rad 1.1 links to 5154 of rad 0.12.  (no action taken)
     B1      X, Y, Z:  45.24  -150.68  -6.5
2.1  Line 1 has 15 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  -0.88  0.610556  0.0
 Origional file contained 2 neurons, seperated into AM62-1 and -2.
     C
Some trees retyped from apical to basal. Corrected using Neuromantic, see swc file header for details.
     C
 


Number of type A irregularities = 0
Number of type B1 irregularities = 79
Number of type B2 irregularities = 1
Number of type C irregularities = 2
