# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\337939-1mo-WT-20x-cerebellum-2_1.swc.swc created with StdSwc version 1.31 on 5/20/22.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\337939-1mo-WT-20x-cerebellum-2_1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  43.91  77.83  25.46
4.3  Radius of line 90 at 1.40222 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  31.68  82.22  20.26
2.5  Seg length ending at pt. 6 <= 0.1 at 0.0173.  (removed)
     A       X, Y, Z:  43.06  77.47  25.21
2.5  Seg length ending at pt. 102 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  32.15  82.12  20.28
2.5  Seg length ending at pt. 145 <= 0.1 at 0.0173.  (removed)
     A       X, Y, Z:  43.06  77.47  25.21
2.5  Seg length ending at pt. 455 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  43.91  77.83  25.46
2.5  Seg length ending at pt. 492 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  53.7  78.23  25.79
2.5  Seg length ending at pt. 596 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  53.7  78.23  25.79
2.7  Line 808 of rad 1.15417 is an included side branch.  (removed)
     A      X, Y, Z:  51.69  65.57  35.12
2.6  Line 1 and line 386 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  43.91  77.83  25.46
2.6  Line 18 and line 124 have the same coordinates.  (second line removed)
     A      X, Y, Z:  39.9  79.4  24.81
2.6  Line 48 and line 89 have the same coordinates.  (second line removed)
     A      X, Y, Z:  32.64  81.98  20.27
2.6  Line 174 and line 204 have the same coordinates.  (second line removed)
     A      X, Y, Z:  39.28  70.21  22.0
2.6  Line 251 and line 274 have the same coordinates.  (second line removed)
     A      X, Y, Z:  25.77  64.7  22.58
2.6  Line 282 and line 320 have the same coordinates.  (second line removed)
     A      X, Y, Z:  24.44  62.22  23.78
2.6  Line 401 and line 444 have the same coordinates.  (second line removed)
     A      X, Y, Z:  43.99  81.95  28.39
2.6  Line 473 and line 723 have the same coordinates.  (second line removed)
     A      X, Y, Z:  48.57  79.8  24.55
2.6  Line 499 and line 582 have the same coordinates.  (second line removed)
     A      X, Y, Z:  55.14  77.67  26.99
2.6  Line 546 and line 560 have the same coordinates.  (second line removed)
     A      X, Y, Z:  67.71  82.36  32.31
2.6  Line 677 and line 697 have the same coordinates.  (second line removed)
     A      X, Y, Z:  55.43  74.99  14.38
 
 


Number of type A irregularities = 17
Number of type B1 irregularities = 3
Number of type B2 irregularities = 0
Number of type C irregularities = 0
