# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\285622-3mo-GFAP-IFN-20x-cortex-2.swc.swc created with StdSwc version 1.31 on 5/20/22.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\285622-3mo-GFAP-IFN-20x-cortex-2.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  57.24  56.85  20.7
4.3  Radius of line 3199 at 2.11011 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  55.63  63.13  22.69
2.5  Seg length ending at pt. 2 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  57.23  56.77  20.65
2.5  Seg length ending at pt. 4 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  57.22  56.6  20.56
2.5  Seg length ending at pt. 6 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  57.21  56.53  20.51
2.5  Seg length ending at pt. 109 <= 0.1 at 0.0911.  (removed)
     A       X, Y, Z:  51.72  42.78  25.2
2.5  Seg length ending at pt. 118 <= 0.1 at 0.0883.  (removed)
     A       X, Y, Z:  52.3  41.66  25.8
2.5  Seg length ending at pt. 310 <= 0.1 at 0.0917.  (removed)
     A       X, Y, Z:  47.59  30.14  28.72
2.5  Seg length ending at pt. 348 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  43.9  27.04  26.51
2.5  Seg length ending at pt. 431 <= 0.1 at 0.0911.  (removed)
     A       X, Y, Z:  46.54  24.32  20.32
2.5  Seg length ending at pt. 440 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  46.54  23.22  19.33
2.5  Seg length ending at pt. 466 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  46.54  23.22  19.33
2.5  Seg length ending at pt. 648 <= 0.1 at 0.0938.  (removed)
     A       X, Y, Z:  48.33  32.79  21.45
2.4  Seg length ending at pt. 658 >= 6.0 stdevs above mean at 1.1699.  (no action taken)
     B1      X, Y, Z:  48.26  32.71  21.71
2.5  Seg length ending at pt. 659 <= 0.1 at 0.0938.  (removed)
     A       X, Y, Z:  48.33  32.79  21.45
2.5  Seg length ending at pt. 821 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  52.14  43.14  15.95
2.5  Seg length ending at pt. 1263 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  57.36  46.29  18.71
2.5  Seg length ending at pt. 1298 <= 0.1 at 0.098.  (removed)
     A       X, Y, Z:  61.93  43.71  17.06
2.5  Seg length ending at pt. 1338 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  66.09  40.72  14.41
2.5  Seg length ending at pt. 1378 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  69.97  36.33  13.81
2.5  Seg length ending at pt. 1533 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  66.65  26.18  14.57
2.4  Seg length ending at pt. 1588 >= 6.0 stdevs above mean at 0.8387.  (no action taken)
     B1      X, Y, Z:  62.68  43.68  17.7
2.4  Seg length ending at pt. 1589 >= 6.0 stdevs above mean at 0.7826.  (no action taken)
     B1      X, Y, Z:  62.63  43.72  18.48
2.4  Seg length ending at pt. 1590 >= 6.0 stdevs above mean at 0.7112.  (no action taken)
     B1      X, Y, Z:  62.64  43.76  19.19
2.5  Seg length ending at pt. 1664 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  64.23  33.1  24.76
2.5  Seg length ending at pt. 1738 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  63.74  28.1  25.13
2.5  Seg length ending at pt. 1928 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  57.21  56.52  20.51
2.4  Seg length ending at pt. 2008 >= 6.0 stdevs above mean at 0.922.  (no action taken)
     B1      X, Y, Z:  47.84  50.88  27.47
2.4  Seg length ending at pt. 2009 >= 6.0 stdevs above mean at 0.8546.  (no action taken)
     B1      X, Y, Z:  47.86  51.18  28.27
2.4  Seg length ending at pt. 2010 >= 6.0 stdevs above mean at 0.7585.  (no action taken)
     B1      X, Y, Z:  47.92  51.44  28.98
2.5  Seg length ending at pt. 2207 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  57.21  56.52  20.51
2.5  Seg length ending at pt. 2372 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  36.46  45.2  19.45
2.5  Seg length ending at pt. 2576 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  50.33  58.69  18.49
2.5  Seg length ending at pt. 2640 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  41.08  58.25  17.73
2.5  Seg length ending at pt. 2729 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  35.12  59.84  18.08
2.5  Seg length ending at pt. 2839 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  46.46  62.24  14.65
2.5  Seg length ending at pt. 3117 <= 0.1 at 0.0883.  (removed)
     A       X, Y, Z:  42.5  44.31  4.74
2.5  Seg length ending at pt. 3160 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  57.24  56.85  20.7
2.5  Seg length ending at pt. 3304 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  46.07  71.96  38.51
2.5  Seg length ending at pt. 3381 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  57.24  56.85  20.7
2.5  Seg length ending at pt. 3427 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  58.83  63.38  20.97
2.5  Seg length ending at pt. 3519 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  64.47  75.63  22.96
2.5  Seg length ending at pt. 3524 <= 0.1 at 0.0964.  (removed)
     A       X, Y, Z:  64.3  76.29  22.79
2.5  Seg length ending at pt. 3704 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  54.07  67.03  22.35
2.4  Seg length ending at pt. 3994 >= 6.0 stdevs above mean at 0.7066.  (no action taken)
     B1      X, Y, Z:  54.01  67.25  21.66
2.4  Seg length ending at pt. 4129 >= 6.0 stdevs above mean at 0.7269.  (no action taken)
     B1      X, Y, Z:  65.12  48.6  32.53
2.4  Seg length ending at pt. 4130 >= 6.0 stdevs above mean at 0.781.  (no action taken)
     B1      X, Y, Z:  65.08  48.6  33.31
2.4  Seg length ending at pt. 4131 >= 6.0 stdevs above mean at 0.8165.  (no action taken)
     B1      X, Y, Z:  64.99  48.65  34.12
2.4  Seg length ending at pt. 4132 >= 6.0 stdevs above mean at 0.8424.  (no action taken)
     B1      X, Y, Z:  64.87  48.73  34.95
2.5  Seg length ending at pt. 4281 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  71.0  63.71  21.01
2.5  Seg length ending at pt. 4354 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  74.35  73.06  17.78
2.5  Seg length ending at pt. 4390 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  75.66  77.81  18.53
2.5  Seg length ending at pt. 4408 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  75.66  77.81  18.53
2.4  Seg length ending at pt. 4483 >= 6.0 stdevs above mean at 0.7323.  (no action taken)
     B1      X, Y, Z:  70.96  63.75  21.77
2.5  Seg length ending at pt. 4518 <= 0.1 at 0.0854.  (removed)
     A       X, Y, Z:  71.16  58.46  19.04
2.5  Seg length ending at pt. 4626 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  74.84  49.0  21.37
2.5  Seg length ending at pt. 4756 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  57.46  56.92  20.67
2.5  Seg length ending at pt. 4863 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  70.44  48.5  21.98
2.5  Seg length ending at pt. 7 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  57.21  56.52  20.51
2.6  Line 65 and line 1239 have the same coordinates.  (second line removed)
     A      X, Y, Z:  53.97  48.0  20.79
2.6  Line 72 and line 789 have the same coordinates.  (second line removed)
     A      X, Y, Z:  52.93  47.58  21.69
2.6  Line 110 and line 773 have the same coordinates.  (second line removed)
     A      X, Y, Z:  51.77  42.71  25.22
2.6  Line 119 and line 587 have the same coordinates.  (second line removed)
     A      X, Y, Z:  52.32  41.6  25.86
2.6  Line 161 and line 246 have the same coordinates.  (second line removed)
     A      X, Y, Z:  55.14  35.98  29.2
2.6  Line 178 and line 230 have the same coordinates.  (second line removed)
     A      X, Y, Z:  56.65  34.21  33.09
2.6  Line 311 and line 546 have the same coordinates.  (second line removed)
     A      X, Y, Z:  47.55  30.07  28.71
2.6  Line 349 and line 380 have the same coordinates.  (second line removed)
     A      X, Y, Z:  43.82  27.03  26.49
2.6  Line 395 and line 402 have the same coordinates.  (second line removed)
     A      X, Y, Z:  44.62  28.06  21.36
2.6  Line 432 and line 513 have the same coordinates.  (second line removed)
     A      X, Y, Z:  46.53  24.23  20.31
2.6  Line 654 and line 658 have the same coordinates.  (second line removed)
     A      X, Y, Z:  48.07  32.33  20.62
2.6  Line 822 and line 1149 have the same coordinates.  (second line removed)
     A      X, Y, Z:  52.12  43.07  15.89
2.6  Line 828 and line 1068 have the same coordinates.  (second line removed)
     A      X, Y, Z:  51.61  42.26  14.01
2.6  Line 832 and line 860 have the same coordinates.  (second line removed)
     A      X, Y, Z:  51.5  42.1  13.25
2.6  Line 880 and line 1066 have the same coordinates.  (second line removed)
     A      X, Y, Z:  52.47  44.88  7.55
2.6  Line 884 and line 977 have the same coordinates.  (second line removed)
     A      X, Y, Z:  52.43  44.41  7.14
2.6  Line 1264 and line 1862 have the same coordinates.  (second line removed)
     A      X, Y, Z:  57.44  46.24  18.67
2.6  Line 1299 and line 1811 have the same coordinates.  (second line removed)
     A      X, Y, Z:  62.01  43.67  17.02
2.6  Line 1304 and line 1588 have the same coordinates.  (second line removed)
     A      X, Y, Z:  62.8  43.67  16.87
2.6  Line 1322 and line 1563 have the same coordinates.  (second line removed)
     A      X, Y, Z:  64.99  43.33  15.23
2.6  Line 1339 and line 1439 have the same coordinates.  (second line removed)
     A      X, Y, Z:  66.13  40.65  14.41
2.6  Line 1379 and line 1396 have the same coordinates.  (second line removed)
     A      X, Y, Z:  70.02  36.28  13.79
2.6  Line 1534 and line 1561 have the same coordinates.  (second line removed)
     A      X, Y, Z:  66.63  26.12  14.61
2.6  Line 1573 and line 1586 have the same coordinates.  (second line removed)
     A      X, Y, Z:  65.35  44.61  11.72
2.6  Line 1665 and line 1707 have the same coordinates.  (second line removed)
     A      X, Y, Z:  64.23  33.02  24.75
2.6  Line 1739 and line 1799 have the same coordinates.  (second line removed)
     A      X, Y, Z:  63.72  28.03  25.17
2.6  Line 2012 and line 2081 have the same coordinates.  (second line removed)
     A      X, Y, Z:  47.99  51.64  29.59
2.6  Line 2373 and line 2411 have the same coordinates.  (second line removed)
     A      X, Y, Z:  36.4  45.19  19.47
2.6  Line 2477 and line 2503 have the same coordinates.  (second line removed)
     A      X, Y, Z:  34.22  35.66  14.86
2.6  Line 2577 and line 2802 have the same coordinates.  (second line removed)
     A      X, Y, Z:  50.25  58.68  18.46
2.6  Line 2641 and line 2775 have the same coordinates.  (second line removed)
     A      X, Y, Z:  41.0  58.29  17.73
2.6  Line 2677 and line 2724 have the same coordinates.  (second line removed)
     A      X, Y, Z:  35.82  59.15  19.03
2.6  Line 2730 and line 2773 have the same coordinates.  (second line removed)
     A      X, Y, Z:  35.07  59.91  18.03
2.6  Line 2840 and line 2935 have the same coordinates.  (second line removed)
     A      X, Y, Z:  46.4  62.32  14.63
2.6  Line 2973 and line 3007 have the same coordinates.  (second line removed)
     A      X, Y, Z:  41.98  59.65  11.87
2.6  Line 3118 and line 3132 have the same coordinates.  (second line removed)
     A      X, Y, Z:  42.46  44.24  4.76
2.6  Line 3305 and line 3360 have the same coordinates.  (second line removed)
     A      X, Y, Z:  46.01  72.01  38.57
2.6  Line 3386 and line 4041 have the same coordinates.  (second line removed)
     A      X, Y, Z:  57.94  57.34  20.81
2.6  Line 3428 and line 3663 have the same coordinates.  (second line removed)
     A      X, Y, Z:  58.84  63.45  20.94
2.6  Line 3520 and line 3631 have the same coordinates.  (second line removed)
     A      X, Y, Z:  64.5  75.71  22.96
2.6  Line 3525 and line 3588 have the same coordinates.  (second line removed)
     A      X, Y, Z:  64.26  76.37  22.76
2.6  Line 3705 and line 3994 have the same coordinates.  (second line removed)
     A      X, Y, Z:  54.07  67.11  22.35
2.6  Line 3776 and line 3872 have the same coordinates.  (second line removed)
     A      X, Y, Z:  51.17  77.11  23.04
2.6  Line 3876 and line 3904 have the same coordinates.  (second line removed)
     A      X, Y, Z:  50.67  77.0  21.27
2.6  Line 4056 and line 4134 have the same coordinates.  (second line removed)
     A      X, Y, Z:  60.56  58.02  22.7
2.6  Line 4077 and line 4099 have the same coordinates.  (second line removed)
     A      X, Y, Z:  63.34  57.93  27.44
2.6  Line 4172 and line 4225 have the same coordinates.  (second line removed)
     A      X, Y, Z:  65.71  60.18  17.74
2.6  Line 4257 and line 4511 have the same coordinates.  (second line removed)
     A      X, Y, Z:  70.84  59.79  19.01
2.6  Line 4282 and line 4483 have the same coordinates.  (second line removed)
     A      X, Y, Z:  71.01  63.78  21.04
2.6  Line 4288 and line 4481 have the same coordinates.  (second line removed)
     A      X, Y, Z:  71.11  64.64  21.73
2.6  Line 4297 and line 4436 have the same coordinates.  (second line removed)
     A      X, Y, Z:  71.46  65.71  19.73
2.6  Line 4362 and line 4424 have the same coordinates.  (second line removed)
     A      X, Y, Z:  73.92  73.93  17.13
2.6  Line 4519 and line 4558 have the same coordinates.  (second line removed)
     A      X, Y, Z:  71.18  58.39  19.1
2.6  Line 4627 and line 4656 have the same coordinates.  (second line removed)
     A      X, Y, Z:  74.83  48.91  21.35
2.6  Line 4864 and line 4946 have the same coordinates.  (second line removed)
     A      X, Y, Z:  70.5  48.44  22.01
4.4  Line 1149 of rad 1.44463 links to 820 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  52.16  42.84  15.77
2.1  Line 1 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  57.24  56.85  20.7
2.1  Line 5 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  57.21  56.53  20.51
 
 


Number of type A irregularities = 99
Number of type B1 irregularities = 18
Number of type B2 irregularities = 0
Number of type C irregularities = 0
