# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\245648-1mo-GFAP-IFN-20x-cerebellum-iba1-1_3.swc.swc created with StdSwc version 1.31 on 5/20/22.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\245648-1mo-GFAP-IFN-20x-cerebellum-iba1-1_3.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  241.99  128.9  17.87
2.5  Seg length ending at pt. 2 <= 0.1 at 0.0762.  (removed)
     A       X, Y, Z:  242.06  128.87  17.87
2.5  Seg length ending at pt. 166 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  259.03  131.5  17.27
2.5  Seg length ending at pt. 204 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  259.03  131.5  17.27
2.4  Seg length ending at pt. 205 >= 6.0 stdevs above mean at 1.7266.  (no action taken)
     B1      X, Y, Z:  260.3  131.25  16.11
2.5  Seg length ending at pt. 688 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  223.58  118.32  10.66
2.5  Seg length ending at pt. 741 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  223.58  118.32  10.66
2.5  Seg length ending at pt. 776 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  228.06  123.42  10.48
2.5  Seg length ending at pt. 998 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  236.24  128.25  11.85
2.5  Seg length ending at pt. 1065 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  241.99  128.9  17.87
2.5  Seg length ending at pt. 1103 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  241.99  128.9  17.87
2.6  Line 1 and line 493 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  241.99  128.9  17.87
2.6  Line 1 and line 606 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  241.99  128.9  17.87
2.6  Line 7 and line 424 have the same coordinates.  (second line removed)
     A      X, Y, Z:  243.23  128.37  17.8
2.6  Line 12 and line 243 have the same coordinates.  (second line removed)
     A      X, Y, Z:  245.81  127.91  17.8
2.6  Line 21 and line 228 have the same coordinates.  (second line removed)
     A      X, Y, Z:  247.91  132.1  17.75
2.6  Line 29 and line 152 have the same coordinates.  (second line removed)
     A      X, Y, Z:  251.33  134.57  17.83
2.6  Line 44 and line 67 have the same coordinates.  (second line removed)
     A      X, Y, Z:  257.69  139.83  15.36
2.6  Line 181 and line 194 have the same coordinates.  (second line removed)
     A      X, Y, Z:  267.4  133.46  16.92
2.6  Line 245 and line 413 have the same coordinates.  (second line removed)
     A      X, Y, Z:  246.81  127.01  18.9
2.6  Line 251 and line 371 have the same coordinates.  (second line removed)
     A      X, Y, Z:  248.64  124.43  20.28
2.6  Line 264 and line 364 have the same coordinates.  (second line removed)
     A      X, Y, Z:  252.49  118.48  19.45
2.6  Line 273 and line 351 have the same coordinates.  (second line removed)
     A      X, Y, Z:  255.38  114.58  19.19
2.6  Line 282 and line 308 have the same coordinates.  (second line removed)
     A      X, Y, Z:  256.9  109.89  19.14
2.6  Line 439 and line 467 have the same coordinates.  (second line removed)
     A      X, Y, Z:  243.86  119.06  20.45
2.6  Line 493 and line 606 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  241.99  128.9  17.87
2.6  Line 503 and line 555 have the same coordinates.  (second line removed)
     A      X, Y, Z:  242.63  131.7  24.1
2.6  Line 537 and line 547 have the same coordinates.  (second line removed)
     A      X, Y, Z:  245.31  142.95  38.74
2.6  Line 562 and line 591 have the same coordinates.  (second line removed)
     A      X, Y, Z:  240.67  136.38  24.4
2.6  Line 618 and line 634 have the same coordinates.  (second line removed)
     A      X, Y, Z:  236.68  128.43  12.26
2.6  Line 644 and line 877 have the same coordinates.  (second line removed)
     A      X, Y, Z:  232.05  125.07  11.0
2.6  Line 651 and line 675 have the same coordinates.  (second line removed)
     A      X, Y, Z:  228.56  123.79  10.58
2.6  Line 703 and line 728 have the same coordinates.  (second line removed)
     A      X, Y, Z:  218.86  112.22  14.16
2.6  Line 788 and line 810 have the same coordinates.  (second line removed)
     A      X, Y, Z:  227.86  127.61  16.99
2.6  Line 821 and line 845 have the same coordinates.  (second line removed)
     A      X, Y, Z:  226.88  122.29  22.88
2.6  Line 886 and line 969 have the same coordinates.  (second line removed)
     A      X, Y, Z:  233.63  119.73  14.45
2.6  Line 900 and line 948 have the same coordinates.  (second line removed)
     A      X, Y, Z:  233.12  111.9  16.2
2.6  Line 914 and line 933 have the same coordinates.  (second line removed)
     A      X, Y, Z:  235.42  104.55  17.68
2.6  Line 1003 and line 1052 have the same coordinates.  (second line removed)
     A      X, Y, Z:  235.92  129.16  15.22
2.6  Line 1080 and line 1088 have the same coordinates.  (second line removed)
     A      X, Y, Z:  237.26  122.7  24.29
4.4  Line 948 of rad 1.34046 links to 899 of rad 0.67.  (no action taken)
     B1      X, Y, Z:  232.49  111.87  16.78
2.1  Line 1 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  241.99  128.9  17.87
 
 


Number of type A irregularities = 35
Number of type B1 irregularities = 7
Number of type B2 irregularities = 0
Number of type C irregularities = 0
